Detail information of GWHGAAEX007117/evm.TU.scaffold_197.32
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2603 | 5.00E-136 | Oligosaccharyltransferase, gamma subunit |
| nr | gi|743793513|ref|XP_010923949.1| | 2.80E-155 | PREDICTED: probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B [Elaeis guineensis] |
| Swissprot | tr|Q94I55|OST3_ORYSJ | 3.00E-137 | Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 (Precursor) |
| trEMBL | tr|B9RXQ7|B9RXQ7_RICCO | 6.00E-140 | Tumor suppressor candidate, putative {ECO:0000313|EMBL:EEF43913.1} |
| TAIR | AT1G61790 | 5.00E-136 | Oligosaccharyltransferase complex/magnesium transporter family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000196 | 1492981 | 1494453 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007117
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04756.12 | OST3_OST6 | 35 | 332 | 1.10E-75 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K12669 | OST3, OST6 | Metabolic pathways | map01100 |
| N-Glycan biosynthesis | map00510 | ||
| Various types of N-glycan biosynthesis | map00513 | ||
| Protein processing in endoplasmic reticulum | map04141 |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 54.330 |
| SRR2545915 | Juvenile tuber | 56.510 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 69.930 |
| SRR5643514 | five period of Gastrodia elata | 55.680 | |
| SRR5643515 | five period of Gastrodia elata | 65.290 | |
| SRR5643524 | five period of Gastrodia elata | 60.750 | |
| SRR5643525 | five period of Gastrodia elata | 89.910 | |
| SRR5643528 | five period of Gastrodia elata | 100.540 | |
| SRR5643658 | five period of Gastrodia elata | 93.360 | |
| SRR5643659 | five period of Gastrodia elata | 70.690 | |
| SRR5643660 | five period of Gastrodia elata | 69.200 | |
| SRR5643661 | five period of Gastrodia elata | 71.740 | |
| SRR5643662 | five period of Gastrodia elata | 74.700 | |
| SRR5643663 | five period of Gastrodia elata | 73.540 | |
| SRR5643664 | five period of Gastrodia elata | 60.640 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 54.720 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 65.410 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 58.810 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 50.730 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 48.470 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 48.520 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 51.420 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 53.130 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 59.100 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 51.780 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 72.930 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 72.930 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 60.80 |
| Juven | Juvenile tuber | 50.93 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 68.09 | |
| Mother_Juven | Mother tuber of Juvenile | 49.06 |