Detail information of GWHGAAEX007125/evm.TU.scaffold_198.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|557827563|ref|YP_008800026.1|2.00E-47GTPase [Exiguobacterium sp. MH3]
KOGKOG12490Predicted GTPases
nrgi|672374517|gb|AIJ27455.1|0nitric oxide-associated protein [Elaeis guineensis]
Swissprottr|Q66GP9|NOA1_ARATH0NO-associated protein 1, chloroplastic/mitochondrial (Precursor)
trEMBLtr|A0A088CQS0|A0A088CQS0_ELAGV0Nitric oxide-associated protein {ECO:0000313|EMBL:AIJ27455.1}
TAIRAT3G474500P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000201124223197520+
Transcript Sequence

Network for GWHGAAEX007125

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01926.22MMR_HSR12903551.10E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13427NOA1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Arginine biosynthesismap00220
Arginine and proline metabolismmap00330
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.950
SRR2545915Juvenile tuber7.460
SRP108465SRR5643513five period of Gastrodia elata7.800
SRR5643514five period of Gastrodia elata9.510
SRR5643515five period of Gastrodia elata7.270
SRR5643524five period of Gastrodia elata8.960
SRR5643525five period of Gastrodia elata8.840
SRR5643528five period of Gastrodia elata8.390
SRR5643658five period of Gastrodia elata6.680
SRR5643659five period of Gastrodia elata8.560
SRR5643660five period of Gastrodia elata6.730
SRR5643661five period of Gastrodia elata7.290
SRR5643662five period of Gastrodia elata7.400
SRR5643663five period of Gastrodia elata8.820
SRR5643664five period of Gastrodia elata7.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.410
SRR6049655Rhizomagastrodiae_C368-T10_good_19.880
SRR6049656Rhizomagastrodiae_C368-T07_good_18.440
SRR6049657Rhizomagastrodiae_C368-T07_good_17.450
SRR6049658Rhizomagastrodiae_C368-T04_good_18.170
SRR6049659Rhizomagastrodiae_C368-T04_good_18.240
SRR6049660Rhizomagastrodiae_C368-T01_good_17.880
SRR6049661Rhizomagastrodiae_C368-T04_good_17.480
SRR6049662Rhizomagastrodiae_C368-T01_good_19.870
SRR6049663Rhizomagastrodiae_C368-T01_good_19.820
SRR6049664Rhizomagastrodiae_C368-T10_good_19.260
SRR6049665Rhizomagastrodiae_C368-T10_good_19.260
SRP279888GastroGastrodia elata tuber 13.31
JuvenJuvenile tuber14.63
Mother_GastroMother tuber of Gastrodia elata 15.51
Mother_JuvenMother tuber of Juvenile 17.23