Detail information of GWHGAAEX007127/evm.TU.scaffold_198.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17672.00E-4840S ribosomal protein S25
nrgi|743764188|ref|XP_010912299.1|6.09E-53PREDICTED: 40S ribosomal protein S25 [Elaeis guineensis]
Swissprottr|Q9T029|RS254_ARATH5.00E-4940S ribosomal protein S25-4
trEMBLtr|A0A067JTS7|A0A067JTS7_JATCU2.00E-51Uncharacterized protein {ECO:0000313|EMBL:KDP27277.1}
TAIRAT4G392002.00E-48Ribosomal protein S25 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000201258563260360+
Transcript Sequence

Network for GWHGAAEX007127

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03297.14Ribosomal_S2571041.80E-41
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02975RP-S25e, RPS25 Ribosome map03010

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms90.520
SRR2545915Juvenile tuber85.010
SRP108465SRR5643513five period of Gastrodia elata121.100
SRR5643514five period of Gastrodia elata157.010
SRR5643515five period of Gastrodia elata125.350
SRR5643524five period of Gastrodia elata155.460
SRR5643525five period of Gastrodia elata179.090
SRR5643528five period of Gastrodia elata209.900
SRR5643658five period of Gastrodia elata190.980
SRR5643659five period of Gastrodia elata133.080
SRR5643660five period of Gastrodia elata125.290
SRR5643661five period of Gastrodia elata126.280
SRR5643662five period of Gastrodia elata128.440
SRR5643663five period of Gastrodia elata125.370
SRR5643664five period of Gastrodia elata108.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_190.940
SRR6049655Rhizomagastrodiae_C368-T10_good_178.790
SRR6049656Rhizomagastrodiae_C368-T07_good_1117.820
SRR6049657Rhizomagastrodiae_C368-T07_good_186.440
SRR6049658Rhizomagastrodiae_C368-T04_good_187.530
SRR6049659Rhizomagastrodiae_C368-T04_good_177.590
SRR6049660Rhizomagastrodiae_C368-T01_good_182.100
SRR6049661Rhizomagastrodiae_C368-T04_good_185.190
SRR6049662Rhizomagastrodiae_C368-T01_good_1143.750
SRR6049663Rhizomagastrodiae_C368-T01_good_1101.820
SRR6049664Rhizomagastrodiae_C368-T10_good_1170.470
SRR6049665Rhizomagastrodiae_C368-T10_good_1170.470
SRP279888GastroGastrodia elata tuber 88.39
JuvenJuvenile tuber35.63
Mother_GastroMother tuber of Gastrodia elata 60.57
Mother_JuvenMother tuber of Juvenile 25.21