Gene detail

Detail information of GWHGAAEX007138/evm.TU.scaffold_198.22

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743802384\|ref\|XP_010926602.1\|	0	PREDICTED: uncharacterized protein LOC105048836 isoform X1 [Elaeis guineensis]
trEMBL	tr\|I1HUG8\|I1HUG8_BRADI	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI2G58410.1}
TAIR	AT1G04900	1.00E-140	Protein of unknown function (DUF185)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000201	620026	662449	-

Transcript Sequence
>GWHTAAEX007138 CAGTCCCTTGCCAGGTTTACAACCCGCCCTGTAACGAACGAAGCCGCATTGTCTCCACACATGTTCAGGAAGTCGGCCTCACGATTTTCTTTTCCGGCGCCGTTCCGGACAACCAAAAGTAATAGTCTCCCATTGCTCCTCTCTGCTATGGTCTTCCAAATTTCCTCTGCTCCCTCATTCAATGTTATTATCGGTTTCCTCTCAGTTTTTTCCCAGCTGTGCTATCAGTACGTGCCTTCTTCCGCTCTCGTTTCCACCAGTTTTATTGGCGACAAGCCCTTACTCGTTCGCGATTTCATACGAGCGTCATTGTATGACCCAGAACATGGATATTTCTCAAAGATTTCGGGGCCAGTTGGAGTTCTGGAGAGGAGTATAAAGTTCAATCATATCCGAGGCCGAGAAGCTTATCTGCAGTACTTGGATAAAATCTACAAGCAACATGATGTGGCTTGGTTTACACCAGTTGAACTTTTCAAGCCATGGTATGCACATGCTATAGCAGAAGCAATATTGCGAACAGCCAACCTCTCAGTGCCACTAAAGATATATGAAATCGGAGGTGGCTCTGGAACTTGTGCCAAGGGTATACTGGATTACATGTTGTTAAATGCACCTGAAAGGGTATACAATAACTTGACCTACATCTCAGTGGAGATAAGTTCTACCCTTGCAACAAAACAATTAGAGACCGTTGGCGAAGTTTCAAGTCATCTAAAACGCTATAGAGTAGAAAATCGGGATGCATTAGATAGAAGTGAATGGCATGCTGACCCCAATCCTTGTTGGGTTGTAATGCTTGAGGTCCTTGATAATCTTCCACATGACCTTGTATATTCTACGGATCAAATTTCTCCATGGATGGAGGCATGGATTGAGAAAGCACAAGACAGCTTACAAGTCTCCGAGATCTATAAGCCATTGCAAGATACGCTGATTGCTCAATGTGTCAAGATTGTTGGCATGGACAAGGACAATACTACACAGACAAGCGGATTTCTTTCTGCAGCAAGAAAAATTTGGACGAAGGCATTTCCAAAGCCTCATAAAGTTTGGTTACCAACTGGTTGCCTGCAACTCCTTGAAGTTCTACATCAAGCTTTGCCAAAGATGTCCCTTGTTGCGTCTGATTTTAGCTATCTTCCAGATGTAAGGATTATGGGCGATCGGGCCCCACTTGTTTCTACCAAGAAAGACGGGATCACAGTTGATCATATAAGCTATCTGGATGCAAAGGGTGATTCTGATATATTCTTCCCAACAGATTTTTGGCTTCTGGAGAGAATAGATCACCACTGTTCTGGATGGGAGAAAAGCGTGGCAAAGATCCCCCGTTCATCTATTAAGCCTATAAAGTTGAGAAGAAGCATCACACTCGATACTGCTGCTTTCTTCGAGCAATTCGGTTTGCCGTCCAAGACGCGCACTAAGGATGGGTATAATCCCCTTATGGATGATTTCAAGAACACAAAGTTTTATCTAAGTGTGCCCACACACAACATCCTCTGAGTAGCTGGTGAAGCTGTGAGAGCATATATATGCTTCAGGCATGCTTCGACAAGGTTCTACTCTGTCATTTTTTTTTGTGATTTTATGCAGTATTTTCTTCAATTGCAGACGAAAAGCAGAGCAGTTGCATGCAGCTGTGTGCAGCAACTGCACTGCATCCGTCTGCAGGCGCAGAGTCTGAACATTGTCAAGAGACTAGGATTATAGATTAATTGAAAAAGATTTGTTCTTGTTATTCTTATTATGTCATGTTAACAATATTTTGTACTTAAATATATGTTATTA

Network for GWHGAAEX007138

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02636.16	Methyltransf_28	158	417	1.90E-29

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.100
SRP064423	SRR2545915	Juvenile tuber	6.810
SRP108465	SRR5643513	five period of Gastrodia elata	3.390
	SRR5643514	five period of Gastrodia elata	4.760
	SRR5643515	five period of Gastrodia elata	3.490
	SRR5643524	five period of Gastrodia elata	4.620
	SRR5643525	five period of Gastrodia elata	2.570
	SRR5643528	five period of Gastrodia elata	2.160
	SRR5643658	five period of Gastrodia elata	1.760
	SRR5643659	five period of Gastrodia elata	4.630
	SRR5643660	five period of Gastrodia elata	4.520
	SRR5643661	five period of Gastrodia elata	5.010
	SRR5643662	five period of Gastrodia elata	4.480
	SRR5643663	five period of Gastrodia elata	4.710
	SRR5643664	five period of Gastrodia elata	4.380
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.730
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.250
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.030
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.340
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.670
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.680
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.840
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.930
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.070
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.240
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.240
SRP279888	Gastro	Gastrodia elata tuber	6.70
	Juven	Juvenile tuber	5.72
	Mother_Gastro	Mother tuber of Gastrodia elata	4.46
	Mother_Juven	Mother tuber of Juvenile	4.75