Detail information of GWHGAAEX007160/evm.TU.scaffold_198.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|221639215|ref|YP_002525477.1|9.00E-72HSR1-like GTP-binding protein [Rhodobacter sphaeroides KD131]
KOGKOG04106.00E-117Predicted GTP binding protein
nrgi|743848371|ref|XP_010939343.1|0PREDICTED: GTP-binding protein At3g49725, chloroplastic isoform X1 [Elaeis guineensis]
Swissprottr|Q0WTB4|Y3725_ARATH3.00E-158GTP-binding protein At3g49725, chloroplastic (Precursor)
trEMBLtr|K4A7F1|K4A7F1_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si034807m}
trEMBLtr|K4A7F1|K4A7F1_SETIT3.00E-07Uncharacterized protein {ECO:0000313|EnsemblPlants:Si034807m}
TAIRAT3G49730_26.00E-117Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000020111555431177061-
Transcript Sequence

Network for GWHGAAEX007160

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13167.5GTP-bdg_N1181928.20E-13
PF16360.4GTP-bdg_M1952911.50E-18
PF01926.22MMR_HSR13054172.50E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.680
SRR2545915Juvenile tuber22.420
SRP108465SRR5643513five period of Gastrodia elata18.790
SRR5643514five period of Gastrodia elata18.590
SRR5643515five period of Gastrodia elata17.720
SRR5643524five period of Gastrodia elata20.060
SRR5643525five period of Gastrodia elata26.870
SRR5643528five period of Gastrodia elata23.670
SRR5643658five period of Gastrodia elata27.680
SRR5643659five period of Gastrodia elata20.090
SRR5643660five period of Gastrodia elata26.820
SRR5643661five period of Gastrodia elata21.750
SRR5643662five period of Gastrodia elata23.690
SRR5643663five period of Gastrodia elata26.670
SRR5643664five period of Gastrodia elata26.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.170
SRR6049655Rhizomagastrodiae_C368-T10_good_116.460
SRR6049656Rhizomagastrodiae_C368-T07_good_117.630
SRR6049657Rhizomagastrodiae_C368-T07_good_121.940
SRR6049658Rhizomagastrodiae_C368-T04_good_123.110
SRR6049659Rhizomagastrodiae_C368-T04_good_121.300
SRR6049660Rhizomagastrodiae_C368-T01_good_119.740
SRR6049661Rhizomagastrodiae_C368-T04_good_119.620
SRR6049662Rhizomagastrodiae_C368-T01_good_115.980
SRR6049663Rhizomagastrodiae_C368-T01_good_117.090
SRR6049664Rhizomagastrodiae_C368-T10_good_114.660
SRR6049665Rhizomagastrodiae_C368-T10_good_114.660
SRP279888GastroGastrodia elata tuber 32.48
JuvenJuvenile tuber22.99
Mother_GastroMother tuber of Gastrodia elata 21.22
Mother_JuvenMother tuber of Juvenile 19.52