Detail information of GWHGAAEX007162/evm.TU.scaffold_198.49
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|302878409|ref|YP_003846973.1| | 6.00E-24 | serine/threonine protein kinase [Gallionella capsiferriformans ES-2] |
| KOG | KOG0663 | 0 | Protein kinase PITSLRE and related kinases |
| nr | gi|743765248|ref|XP_010912840.1| | 0 | PREDICTED: cyclin-dependent kinase G-2-like [Elaeis guineensis] |
| Swissprot | tr|Q7XUF4|CDKG2_ORYSJ | 0 | Cyclin-dependent kinase G-2 |
| trEMBL | tr|M0T1L5|M0T1L5_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P25400_001} |
| TAIR | AT1G67580 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000201 | 1189371 | 1193638 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007162
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 368 | 659 | 2.40E-74 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_CDK-PITSLRE |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 130.290 |
| SRR2545915 | Juvenile tuber | 102.820 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 72.410 |
| SRR5643514 | five period of Gastrodia elata | 69.210 | |
| SRR5643515 | five period of Gastrodia elata | 66.920 | |
| SRR5643524 | five period of Gastrodia elata | 68.900 | |
| SRR5643525 | five period of Gastrodia elata | 57.610 | |
| SRR5643528 | five period of Gastrodia elata | 42.410 | |
| SRR5643658 | five period of Gastrodia elata | 56.240 | |
| SRR5643659 | five period of Gastrodia elata | 84.620 | |
| SRR5643660 | five period of Gastrodia elata | 104.310 | |
| SRR5643661 | five period of Gastrodia elata | 86.180 | |
| SRR5643662 | five period of Gastrodia elata | 81.110 | |
| SRR5643663 | five period of Gastrodia elata | 95.790 | |
| SRR5643664 | five period of Gastrodia elata | 94.970 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 116.240 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 74.160 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 85.850 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 140.940 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 153.850 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 191.360 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 124.750 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 129.050 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 73.460 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 90.910 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 69.870 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 69.870 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 125.75 |
| Juven | Juvenile tuber | 150.45 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 75.73 | |
| Mother_Juven | Mother tuber of Juvenile | 125.32 |