Detail information of GWHGAAEX007165/evm.TU.scaffold_198.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13030Amino acid transporters
nrgi|695053204|ref|XP_009414682.1|0PREDICTED: lysine histidine transporter 1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FKS8|LHT1_ARATH0Lysine histidine transporter 1
trEMBLtr|I1N7L1|I1N7L1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G24520.1}
TAIRAT5G407800lysine histidine transporter 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000020112522601260498+
Transcript Sequence

Network for GWHGAAEX007165

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.17Aa_trans414359.60E-107
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.720
SRR2545915Juvenile tuber39.620
SRP108465SRR5643513five period of Gastrodia elata127.720
SRR5643514five period of Gastrodia elata85.860
SRR5643515five period of Gastrodia elata108.190
SRR5643524five period of Gastrodia elata119.480
SRR5643525five period of Gastrodia elata30.270
SRR5643528five period of Gastrodia elata21.440
SRR5643658five period of Gastrodia elata18.840
SRR5643659five period of Gastrodia elata40.030
SRR5643660five period of Gastrodia elata28.820
SRR5643661five period of Gastrodia elata46.990
SRR5643662five period of Gastrodia elata38.110
SRR5643663five period of Gastrodia elata23.890
SRR5643664five period of Gastrodia elata27.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_157.460
SRR6049655Rhizomagastrodiae_C368-T10_good_174.920
SRR6049656Rhizomagastrodiae_C368-T07_good_161.980
SRR6049657Rhizomagastrodiae_C368-T07_good_143.020
SRR6049658Rhizomagastrodiae_C368-T04_good_136.720
SRR6049659Rhizomagastrodiae_C368-T04_good_126.500
SRR6049660Rhizomagastrodiae_C368-T01_good_134.050
SRR6049661Rhizomagastrodiae_C368-T04_good_141.030
SRR6049662Rhizomagastrodiae_C368-T01_good_148.440
SRR6049663Rhizomagastrodiae_C368-T01_good_133.850
SRR6049664Rhizomagastrodiae_C368-T10_good_195.380
SRR6049665Rhizomagastrodiae_C368-T10_good_195.380
SRP279888GastroGastrodia elata tuber 26.81
JuvenJuvenile tuber81.36
Mother_GastroMother tuber of Gastrodia elata 289.65
Mother_JuvenMother tuber of Juvenile 293.10