Gene detail

Detail information of GWHGAAEX007169/evm.TU.scaffold_198.58

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|294507855\|ref\|YP_003571913.1\|	3.00E-30	lysophospholipase [Salinibacter ruber M8]
KOG	KOG1455	2.00E-158	Lysophospholipase
nr	gi\|543177377\|gb\|AGV54710.1\|	2.64E-178	monoglyceride lipase [Phaseolus vulgaris]
Swissprot	tr\|Q9C942\|CSE_ARATH	2.00E-57	Caffeoylshikimate esterase
trEMBL	tr\|T2DP36\|T2DP36_PHAVU	1.00E-178	Monoglyceride lipase {ECO:0000313\|EMBL:AGV54710.1}
TAIR	AT5G19290	2.00E-158	alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000201	1280831	1282694	-

Transcript Sequence
>GWHTAAEX007169 GAGGATTAGGTGGGAGGCGCGGTATACAGGTGGTGCATTACTACTACTGCTGCATCAGTAAAGGTCGCCAAAATTAGGGCAGGAAGGAAGGAAGGATGGTGCATCCGGTGGAAGAGGCGGACGATCGGAGCCCTTTCGGGCGTCTGAGCGCGGAAGAGTTCTATGCGCGGCACGGAGTGAGGCACGAGTCGTCCTCCTTCGTCAACCCCCGCGGCCTGCGCATCTTCACCCAGTGGTGTATTCCCGACCGCCCAGTCATTGGCATCGTCGCCGTCATCCATGGCTTCACCGGCGAGTCCAGCTGGTTATTGCAGCTGACGGCCGTCCACATCGCGGAGGCCGGATTCGCTGTCTGCGCCATCGACCACCAGGGCCACGGTTTCTCCGACGGCCTCCGCTCCCACATCCCGGACATTAACCCCGTCGTGGACGACTGCGTTTCCTTCTTCGAGTCCTTCCGCGGCCGCTTCCCCGCCTCTCTCCCCTCCTTCCTCTACTCCGAGTCCCTGGGCGGGGCCATCGCTCTCCTCATCCACCTCCGCCGTTCTTCCCGCCCCTGGGATGGGGCTGTGCTCAACGGCGCCATGTGCGGCATCAGCGCGAGGTTCAAGCCCCCGTGGCCGCTGGAGCACCTCCTCTGGCTAGCCGCTGCGGCGATCCCCACCTGGCACGTGGTCCCGACCAAGGGGTCCATCCCGGAGGTCTCCTTCAAGGTGGAGTGGAAGCGCCGGCTGGCCATTGCAAGCCCGAGGCGCTCCCTCGCCCGCCCCAGGGCCGCCACAGCCCAGGAACTCCTTCGGGTCTGCCGGGATTTGCAGAGCCGCTTTGAGCAAGTCAACATTCCCCTGCTCATTGTTCACGGAGCCGACGACGCCGTTTGCGACCCAGCCTGCGTGGAGGAACTCCACCGCCGCTCCTCCAGCCCGGACAAGACCCTCATCATCTACCCCGGCATGTGGCATCAACTGGTTGGAGAGCCGCCGGAGAACGTCGAGCTCGTCTTTGGGGACATCATCCGCTGGCTTCGCACTCGGACCGAGCGAGCCGCCGCCGCCCACCAACAACCCGTTGCACCGTTACCCTGATATACCTTCAATCATTGTCCACTTGCCCGCAGCTTTTATCAGTCTTACTTGTATTGAGCACGCTTTTTTTTTAGTTTGATTTATTGCTTACCTATCTACCGCAGATTCAAATCGCTCTTTCTCACCATCAACACTTAAGTCCACCGAAAATTTAATAAAAAATATTGAAATTTTCTATCTGTTCAACTGATTAACAACAAGAACAATGGCGAAATATATTTGTGTTTGGGATGTTTGGTCCGGATTCGTCTCTAACCTATCCATAACCTTATTTAAAAAAGGATTGCGATGGATTGAGGGGAGTTTTGATGGCGCCTAAACTCTCTCAAACCCTACTGTACACTTCTTACCCAATTACCTCTTCTTTGCTTGTACCCTTAGAATTTGTTGTAGATATGCATTTGTGAGGGCTTCAAGTACTTTTTCTTAGACCCAATCATTGTCGTATAATCTTTAGGAGATCACTATGAATTGATGTGCCTGCATGAAATATATTATGCTTTAGATATGTGTGACCTGACTGTTTGAGAAGATTTGGTCATATTGCTTTATTTTGGTGCTATCCAAAAGTTAGGCTTTGAACTTCATAGTTACAGCATATGGGAGCTTCATAGTTACAATATTGGAAGTTTGTAATGCGAGCCAACTTCTTGGAAAGTTCATATTACAAACTGGGTTGATTGTAATACGATCCATTCTTAAATATGAAATTGAAATAAGTGCTTATCATGGATCTGAACAACAGCAGAAACACAAGATTATGTAGAATTATGGACAAT

Network for GWHGAAEX007169

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12146.7	Hydrolase_4	55	295	2.30E-54

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	20.420
SRP064423	SRR2545915	Juvenile tuber	14.860
SRP108465	SRR5643513	five period of Gastrodia elata	51.310
	SRR5643514	five period of Gastrodia elata	33.200
	SRR5643515	five period of Gastrodia elata	42.110
	SRR5643524	five period of Gastrodia elata	36.970
	SRR5643525	five period of Gastrodia elata	44.620
	SRR5643528	five period of Gastrodia elata	36.780
	SRR5643658	five period of Gastrodia elata	49.000
	SRR5643659	five period of Gastrodia elata	36.730
	SRR5643660	five period of Gastrodia elata	40.870
	SRR5643661	five period of Gastrodia elata	52.440
	SRR5643662	five period of Gastrodia elata	54.030
	SRR5643663	five period of Gastrodia elata	43.070
	SRR5643664	five period of Gastrodia elata	48.240
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	44.590
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	70.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	47.700
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	51.640
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	48.560
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	48.880
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	48.920
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	47.990
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	45.310
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	43.660
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	42.570
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	42.570
SRP279888	Gastro	Gastrodia elata tuber	53.79
	Juven	Juvenile tuber	56.57
	Mother_Gastro	Mother tuber of Gastrodia elata	36.91
	Mother_Juven	Mother tuber of Juvenile	33.30