Gene detail

Detail information of GWHGAAEX007171/evm.TU.scaffold_198.60

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|428200498\|ref\|YP_007079087.1\|	5.00E-54	oxyanion-translocating ATPase [Pleurocapsa sp. PCC 7327]
nr	gi\|672128855\|ref\|XP_008787920.1\|	0	PREDICTED: uncharacterized protein At1g26090, chloroplastic [Phoenix dactylifera]
Swissprot	tr\|Q6DYE4\|Y1609_ARATH	3.00E-144	Uncharacterized protein At1g26090, chloroplastic (Precursor)
trEMBL	tr\|M0T5J3\|M0T5J3_MUSAM	1.00E-166	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P09440_001}
TAIR	AT1G26090	1.00E-109	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000201	1450744	1482977	+

Transcript Sequence
>GWHTAAEX007171 GTTGATCATTGAAATTAGTTCGTGAAAGCTGAAAACGATCGCAGTCACTGCCCCGATCGACGTCAATTACAATGGTAGCAGCTCTCATCCCAACGTCCTGCCGATGGCTTTTACCCTATACCCCTAAACATGGCGCTGATCCTCAGATCCGAAGGAAGAGCTGTAATGATCGGAGAATCCAAGCTTCCATGGCGAATTCGGGCGAGTCTTGTAAGAAGCACACCAAAATAGTCACATTCCTTGGCAAGGGAGGCTGTGGGAAGAGCACTGCCGCAGTTCTCGCGGCTAAGCTGTATGCGAGGGAAGGACTGCAAACTTGCTTGGTTGTACATTCACAAGATTTAACTATTGAGCAGCTGATGGGTTGCACAATTGGAAATTCTCCAACTATAATTTCTGAGAATCTATATGCTGTTCATTTGCATAGCAGTAAAATGCTTCTTGAACCTCTTGATCGAATGAAGAAAGTAGATGCTCATATGAAAATAACTCAAGGAATTCTTGAAGGGGTAGTAGGTGAAGAACTTGGTGTACTTCCAGGGATGGATTCTATTTTTGCATTATTAGCGCTTCAAAAATATGGAAATTTTTTTCCAATTAAGGGGAATTGCTCAAAGAAAGAGTTTGACATTGTTATATTTGACGGTAGCAGTTCTGAGGAGACTGTGCGGTTGGTCAGTGCAACTGAAAAAGTAAGTTGGTATCTAAAATATATTCGCAACCTGGCTGAAAAAACAGACATCGGAAGACTGACTGCACCTTCATTATTGAGGCTAGCATATGAATCTGCTTGGCCAAATGCAGGGTTAATTGATGGAAAAACAAGTGCTGATATATGGAATGAAATTGAACAAGCTTTAGAGGAAGCTTCAGCCTTTTTCTGTGACTCTTCAAGGTTTAGGTGCTACCTTGTGGTGGATCCAGAAAAGCCAATGTCGGTTGATGCAGCCTTGCGCTATTGGGGTTGTGCCATACAAGCTGGAAGTAAAATTTATGGTGCATTTGGCTTTGCTCGAAAGTTTTCCTTTGCCACTCAAGAAACCATGAAGAAAATGTCTCCTTTGTGCTTTGCACTGCTTCCATATATTTCCTCATATTCCTCTTTAGACTGGGATGCAGTCCTCGACTCTTTTAGCAACGATGCAAATCACCTGCTTCTTGGTAATACTGTTTCTCTGCATTCATCAGTTTTATTTGATCGCAAACAAAGATCGGTTACCCTTTTTTTCCCTGGATTCAACAAGTCCGAGATCAAGTTGTACCAGTATAGAGGTGGCACAGAACTCTTGGCCGAAGCAGGGGATCAAAGACGCATCATCAAGCTGCCTCCCGGTATGCAAGGAAAGGTTGTAGGTGCTAAGTTCATTGAAAGAAACCTTGTGGTTACCCTGCGATGATTAATAAGCAATTGGTGGCACCGTTGGAGATAATTTGTTGGTCCTGGGCTGCCTATTTGAGGGCACTTGTTTGGATGGATGTCTCTAACATTTGTGCATCTTATTTGCTTCCCGATTCTTCTTTTACTCCCCTTCACAAACAATGGAGGTATTCTGGATATTGGTGGATTCTGGATTGTAAAGAATATTTTGTAGTTTCTCTATCTTTTCATCTTTCATCATAAAAGAAATTGAGCCTCTTCTTTGTTTTCCA

Network for GWHGAAEX007171

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02374.14	ArsA_ATPase	51	290	1.20E-21

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.490
SRP064423	SRR2545915	Juvenile tuber	5.820
SRP108465	SRR5643513	five period of Gastrodia elata	9.510
	SRR5643514	five period of Gastrodia elata	11.540
	SRR5643515	five period of Gastrodia elata	9.470
	SRR5643524	five period of Gastrodia elata	11.070
	SRR5643525	five period of Gastrodia elata	8.800
	SRR5643528	five period of Gastrodia elata	9.250
	SRR5643658	five period of Gastrodia elata	10.390
	SRR5643659	five period of Gastrodia elata	4.090
	SRR5643660	five period of Gastrodia elata	3.580
	SRR5643661	five period of Gastrodia elata	3.650
	SRR5643662	five period of Gastrodia elata	2.840
	SRR5643663	five period of Gastrodia elata	4.450
	SRR5643664	five period of Gastrodia elata	3.080
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.360
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.930
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.170
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	8.890
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	7.730
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.880
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.880
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.920
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.560
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	8.730
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	8.730
SRP279888	Gastro	Gastrodia elata tuber	3.41
	Juven	Juvenile tuber	3.25
	Mother_Gastro	Mother tuber of Gastrodia elata	5.75
	Mother_Juven	Mother tuber of Juvenile	2.29