Detail information of GWHGAAEX007174/evm.TU.scaffold_1980.1
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|379011303|ref|YP_005269115.1| | 4.00E-35 | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut1 [Acetobacterium woodii DSM 1030] |
| KOG | KOG3370 | 6.00E-79 | dUTPase |
| nr | gi|743832749|ref|XP_010935065.1| | 2.63E-82 | PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase-like [Elaeis guineensis] |
| Swissprot | tr|P32518|DUT_SOLLC | 7.00E-84 | Deoxyuridine 5'-triphosphate nucleotidohydrolase |
| trEMBL | tr|W9RT19|W9RT19_9ROSA | 1.00E-82 | Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:EXC07276.1} |
| TAIR | AT3G46940 | 6.00E-79 | DUTP-PYROPHOSPHATASE-LIKE 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00001972 | 1984 | 2484 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007174
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00692.18 | dUTPase | 38 | 165 | 2.80E-44 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01520 | dut, DUT | Metabolic pathways | map01100 |
| Pyrimidine metabolism | map00240 | ||
| Drug metabolism - other enzymes | map00983 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006226 | Biological Process | dUMP biosynthetic process |
| GO:0046081 | Biological Process | dUTP catabolic process |
| GO:0000287 | Molecular Function | magnesium ion binding |
| GO:0004170 | Molecular Function | dUTP diphosphatase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 46.430 |
| SRR2545915 | Juvenile tuber | 36.400 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 29.670 |
| SRR5643514 | five period of Gastrodia elata | 28.480 | |
| SRR5643515 | five period of Gastrodia elata | 31.530 | |
| SRR5643524 | five period of Gastrodia elata | 29.920 | |
| SRR5643525 | five period of Gastrodia elata | 66.400 | |
| SRR5643528 | five period of Gastrodia elata | 32.310 | |
| SRR5643658 | five period of Gastrodia elata | 23.430 | |
| SRR5643659 | five period of Gastrodia elata | 57.440 | |
| SRR5643660 | five period of Gastrodia elata | 46.990 | |
| SRR5643661 | five period of Gastrodia elata | 44.680 | |
| SRR5643662 | five period of Gastrodia elata | 65.890 | |
| SRR5643663 | five period of Gastrodia elata | 54.440 | |
| SRR5643664 | five period of Gastrodia elata | 45.940 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 36.010 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 69.820 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 48.560 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 31.730 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 30.550 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 32.730 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 33.040 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 38.920 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 52.270 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 45.640 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 40.050 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 40.050 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 106.71 |
| Juven | Juvenile tuber | 46.80 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 35.95 | |
| Mother_Juven | Mother tuber of Juvenile | 42.87 |