Detail information of GWHGAAEX007181/evm.TU.scaffold_199.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672163593|ref|XP_008801652.1|8.39E-54PREDICTED: uncharacterized protein LOC103715702 [Phoenix dactylifera]
Swissprottr|Q9LHS9|RBE_ARATH1.00E-27Probable transcriptional regulator RABBIT EARS
trEMBLtr|M0RER6|M0RER6_MUSAM2.00E-47Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P02390_001}
TAIRAT2G377404.00E-25zinc-finger protein 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000202107285108829-
Transcript Sequence

Network for GWHGAAEX007181

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_662852.80E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.640
SRR2545915Juvenile tuber12.540
SRP108465SRR5643513five period of Gastrodia elata66.720
SRR5643514five period of Gastrodia elata57.950
SRR5643515five period of Gastrodia elata37.140
SRR5643524five period of Gastrodia elata49.610
SRR5643525five period of Gastrodia elata1.110
SRR5643528five period of Gastrodia elata0.280
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata24.240
SRR5643660five period of Gastrodia elata29.870
SRR5643661five period of Gastrodia elata28.760
SRR5643662five period of Gastrodia elata20.500
SRR5643663five period of Gastrodia elata17.210
SRR5643664five period of Gastrodia elata18.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_166.400
SRR6049655Rhizomagastrodiae_C368-T10_good_190.700
SRR6049656Rhizomagastrodiae_C368-T07_good_183.580
SRR6049657Rhizomagastrodiae_C368-T07_good_154.660
SRR6049658Rhizomagastrodiae_C368-T04_good_161.810
SRR6049659Rhizomagastrodiae_C368-T04_good_160.480
SRR6049660Rhizomagastrodiae_C368-T01_good_170.270
SRR6049661Rhizomagastrodiae_C368-T04_good_150.760
SRR6049662Rhizomagastrodiae_C368-T01_good_167.250
SRR6049663Rhizomagastrodiae_C368-T01_good_187.480
SRR6049664Rhizomagastrodiae_C368-T10_good_1112.340
SRR6049665Rhizomagastrodiae_C368-T10_good_1112.340
SRP279888GastroGastrodia elata tuber 18.60
JuvenJuvenile tuber55.83
Mother_GastroMother tuber of Gastrodia elata 26.17
Mother_JuvenMother tuber of Juvenile 16.18