Detail information of GWHGAAEX007184/evm.TU.scaffold_199.9
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|332667208|ref|YP_004449996.1| | 1.00E-14 | fatty acid hydroxylase [Haliscomenobacter hydrossis DSM 1100] |
| KOG | KOG0873 | 2.00E-147 | C-4 sterol methyl oxidase |
| nr | gi|695068262|ref|XP_009381066.1| | 2.54E-163 | PREDICTED: methylsterol monooxygenase 2-1-like isoform X1 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q8VWZ8|SMO22_ARATH | 5.00E-148 | Methylsterol monooxygenase 2-2 |
| trEMBL | tr|M0TGF2|M0TGF2_MUSAM | 2.00E-163 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P10640_001} |
| TAIR | AT1G07420 | 2.00E-147 | sterol 4-alpha-methyl-oxidase 2-1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000202 | 246199 | 263053 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007184
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04116.12 | FA_hydroxylase | 111 | 246 | 1.20E-29 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14424 | SMO2 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Steroid biosynthesis | map00100 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008610 | Biological Process | lipid biosynthetic process |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016491 | Molecular Function | oxidoreductase activity |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 24.130 |
| SRR2545915 | Juvenile tuber | 28.130 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 27.770 |
| SRR5643514 | five period of Gastrodia elata | 31.320 | |
| SRR5643515 | five period of Gastrodia elata | 29.560 | |
| SRR5643524 | five period of Gastrodia elata | 29.490 | |
| SRR5643525 | five period of Gastrodia elata | 46.590 | |
| SRR5643528 | five period of Gastrodia elata | 41.940 | |
| SRR5643658 | five period of Gastrodia elata | 50.810 | |
| SRR5643659 | five period of Gastrodia elata | 26.220 | |
| SRR5643660 | five period of Gastrodia elata | 25.810 | |
| SRR5643661 | five period of Gastrodia elata | 26.720 | |
| SRR5643662 | five period of Gastrodia elata | 25.160 | |
| SRR5643663 | five period of Gastrodia elata | 33.020 | |
| SRR5643664 | five period of Gastrodia elata | 25.420 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 23.800 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 41.470 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 26.220 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 25.750 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 24.120 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 22.840 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 20.560 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 20.800 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 25.400 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.670 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 35.030 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 35.030 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 20.19 |
| Juven | Juvenile tuber | 24.05 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 28.23 | |
| Mother_Juven | Mother tuber of Juvenile | 26.00 |