Detail information of GWHGAAEX007189/evm.TU.scaffold_199.14
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG1987 | 2.00E-180 | Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains |
| nr | gi|743841538|ref|XP_010937553.1| | 0 | PREDICTED: BTB/POZ and MATH domain-containing protein 3 isoform X1 [Elaeis guineensis] |
| Swissprot | tr|O22286|BPM3_ARATH | 0 | BTB/POZ and MATH domain-containing protein 3 |
| trEMBL | tr|M0TGF3|M0TGF3_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P10650_001} |
| TAIR | AT2G39760 | 2.00E-180 | BTB/POZ/MATH-domains containing protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000202 | 321004 | 367064 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007189
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00651.30 | BTB | 188 | 305 | 6.30E-27 |
| PF07021.11 | MetW | 534 | 653 | 0.00017 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | BTB |
| Ubiquitin Family | 3-box |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K10523 | SPOP | Hedgehog signaling pathway | map04340 |
| Hedgehog signaling pathway - fly | map04341 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 18.580 |
| SRR2545915 | Juvenile tuber | 20.850 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 19.590 |
| SRR5643514 | five period of Gastrodia elata | 18.970 | |
| SRR5643515 | five period of Gastrodia elata | 23.670 | |
| SRR5643524 | five period of Gastrodia elata | 17.630 | |
| SRR5643525 | five period of Gastrodia elata | 21.640 | |
| SRR5643528 | five period of Gastrodia elata | 23.160 | |
| SRR5643658 | five period of Gastrodia elata | 22.040 | |
| SRR5643659 | five period of Gastrodia elata | 21.620 | |
| SRR5643660 | five period of Gastrodia elata | 23.270 | |
| SRR5643661 | five period of Gastrodia elata | 21.800 | |
| SRR5643662 | five period of Gastrodia elata | 22.850 | |
| SRR5643663 | five period of Gastrodia elata | 21.770 | |
| SRR5643664 | five period of Gastrodia elata | 19.580 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.460 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 15.130 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 24.730 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 23.100 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 25.710 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 27.540 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 26.010 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 23.130 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 26.660 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 22.320 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 25.310 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 25.310 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 22.53 |
| Juven | Juvenile tuber | 24.63 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 33.72 | |
| Mother_Juven | Mother tuber of Juvenile | 30.43 |