Gene detail

Detail information of GWHGAAEX007193/evm.TU.scaffold_199.18

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672182249\|ref\|XP_008811365.1\|	0	PREDICTED: uncharacterized protein LOC103722547 [Phoenix dactylifera]
trEMBL	tr\|W1PLQ1\|W1PLQ1_AMBTC	4.00E-169	Uncharacterized protein {ECO:0000313\|EMBL:ERN08080.1}
TAIR	AT2G37860	7.00E-158	Protein of unknown function (DUF3411)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000202	395226	403901	+

Transcript Sequence
>GWHTAAEX007193 GGGACGTATTTGAAGGAATCGTCGATCGAACAAATCGATAGAATCATTCGCTTCGCTCCAACAAATCTAACTTTGTTGGAGAAGATGCCAGATGGGCTGTTCGAATGCATCTTCTCTTGGCTCGGTTGTCTCCGCTCCTCTTCTCTTCGCGCGATGTAATCGTATTTGGGTGTACCTCGATTTCACCAATTCTATATATAGGAACACAAAATTGAATTAAACTGTCCGCTCATTTTATTTTACACAAAATATAAATAATCCCACTTTAAATGAATTTTTTTAATTCACTCCCTTTTAATTTAATTCAAAGAGCCCATTTATAATAATTGTCTAAAACGCATTGACCTTTAAGGCTTTTTAAGATCCATAAACAAGCACATAATCTCAATATATTGATTGACTCATTTTGGCAATTTCAGGAAAAAAAGAAGAAGATGTTTTCAACTTTCGACTTCTGGAACTGTTAAAATTTCTAATTTTGATGGTCTGTTTTTCCCACAAGCGCAGCGGGTGTTCAGCTCATTCTAGGAGAAGCGCACGAAGAGAGAGCTAGGGTTTCTCGGAGAAGCGCGCGGTTTGTTGCACGTGGCAGATATCTGATTATTTAAAGAACTTCCAAAAAAATTGGTCTTCACATCCCCGCCGCATTCATGCGGGCCTCATCTACACTTGTCAGCGTTTGTTTTAGCCGTCTGTGCATTATTGCAGTTTTTTGTATATTCTGATTGTTACGGCTTTATTTGGGAGAAGAAATTTAATCCTTCTTTTGGGGTATTTCGGGAGTGTCCTGTTGGAGTGAGGCGATTCAACGGGTACTTTAATGGCGTTTTCTTGCTCGAGTATTAGGTTGCAGTTGTCGTCTTCATCTTGTGATTCTCTCTTAGGAGCGAGCATTGTTGAAAGCCTCGGTAGAGAATTTGTGATCGAGGCAAGCAGATTCAGGGTACAGAGAAGCTTCAGTAGTTGCCACAGCTCCCATTTTTCTGTGAATGCTGGCATTTTATCCAAAAAGATTAGTGGAAAACTAACTGCAAGAAGTGAGTTGCAGCCATTGGTAGGTTCAAACTCTAGCGACTTTAAAATTTCTATCAAAGATGCGGAGAGAGATGTTTGTCGTAACGTGGAAAAGAAGGTTCTTGACTCAGAATCTTCTCCAAAGCTTGATCATGGAAATGGAGATGGAGGTCACTCAAGTGGGAATGGGAAATTTCCGCCTGGAGGTGGAGGTGATAACAATGACCATGAAAAGGGAAAAGACAAGGAGGATAAGTTTGGACCTGTCTTGAATTTTGAAGAGGTGATTAAAGAGACGGAGTTGAGGCATACTGTTCTTCCTTCAGATATGCTTGAGGCTGCAAAGACTGTTGGTATTCAGAAAGTTCTCCTTTTTAGATACTTAGATATGCAGTCTTGGGCGTGGCCGCTCGGTATGGCAATGAAATATTGCTCGGTTTTCCGAAATAGAATGCTTGTTGATCCTTCTTTTCTTTTTAAAATTGGAACTGAGATTATTATAGACTCTTGCTGCGCAACATTTGCGGAAATTCAAAAACGGGGCAAGGATTTTTGGGCAGAGTTTGAACTATATGTTGCCGATCTTTTGGTGGGTTTGGTAGTTAATATAGCTTTGGTCAGTATGCTAGCACCATATGCGCGATTTGGGAAACCATCTCCTGCAAAGGGAATTTTCGGGCTTATGACACAGACTTATGGAGCCTTACCTAGCAGTGTTTTTGAGGCCGAACGATCAGGATACAGGTATTCACTTCAGCAACGGATTGGAACGTATTTTTATAAGGGAATTCTCTATGGGTTAGTTGGGTTTGGATGTGGCATTGTAGGGCAAGGAATTGCAAATATGATTATGACAGCTAAAAGAAACGTAAAGAAATCTGAGGACGACATACCTGTCCCACCTCTTATCAAAAGTGCAGCGCTTTGGGGAATGTTTCTTGCGGTTTCTTCAAACACCCGCTACCAAATAGTCAATGGCCTCGAAAGATTGGTCGAAGGATCGCCGGTTGCTAAGAGCACACCTCTTGTTGCTATGGCTTTCACCGTTGCTGTTCGATTCGCTAATAACGTGTATGGCGGCATGCAATTCGTCGATTGGGCCAGGTGGAGCGGTGTTCAGTGAAACTATATATATATATACATAAATATCATGTCATCCATTGGATTTGGGTCGGCCACAGCCTGATCTGATGCGGGATTTGGATCGGATCCAGATCAGGGGAGACCCACTGACTGGCCTACTTATATTGGGCAGGCAGACTGCAGATGCTCGATAACATTCGAATAGGAACCTAGTGTTATTTACAGAAGTTATGGGATTATTCCAAGTGCTAAAAAGCTTCTTTGTTGTCATTTTTAATATTGTTATACTTTTTTTTTTCATGTAATTATGATATTATGTATTTAGTATTTTATGATGTAGGAGGTCTTTATTGCGACTCAAGTTTTGCTTTCTCAAAGGCTCCTAGCTTTTTGGTCTTGCTCAAGCTATACAATTTTTTATTTGATATATCAAAAGTGTTGTGGTGA

Network for GWHGAAEX007193

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF11891.7	RETICULATA-like	214	392	2.00E-61

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.880
SRP064423	SRR2545915	Juvenile tuber	6.440
SRP108465	SRR5643513	five period of Gastrodia elata	5.550
	SRR5643514	five period of Gastrodia elata	4.830
	SRR5643515	five period of Gastrodia elata	4.610
	SRR5643524	five period of Gastrodia elata	4.460
	SRR5643525	five period of Gastrodia elata	3.190
	SRR5643528	five period of Gastrodia elata	4.350
	SRR5643658	five period of Gastrodia elata	3.020
	SRR5643659	five period of Gastrodia elata	5.730
	SRR5643660	five period of Gastrodia elata	6.710
	SRR5643661	five period of Gastrodia elata	6.570
	SRR5643662	five period of Gastrodia elata	6.690
	SRR5643663	five period of Gastrodia elata	6.340
	SRR5643664	five period of Gastrodia elata	5.980
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.050
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.390
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.140
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.010
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.610
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.910
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.620
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.960
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.800
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	14.300
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.380
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.380
SRP279888	Gastro	Gastrodia elata tuber	8.30
	Juven	Juvenile tuber	5.30
	Mother_Gastro	Mother tuber of Gastrodia elata	8.58
	Mother_Juven	Mother tuber of Juvenile	5.28