Detail information of GWHGAAEX007208/evm.TU.scaffold_199.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743790429|ref|XP_010923163.1|1.26E-69PREDICTED: L-type lectin-domain containing receptor kinase VIII.1-like [Elaeis guineensis]
trEMBLtr|M0TLX6|M0TLX6_MUSAM2.00E-50Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P02240_001}
TAIRAT5G010902.00E-17Concanavalin A-like lectin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000202882049883798+
Transcript Sequence

Network for GWHGAAEX007208

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00139.18Lectin_legB372439.90E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0030246Molecular Functioncarbohydrate binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.040
SRR2545915Juvenile tuber6.800
SRP108465SRR5643513five period of Gastrodia elata11.000
SRR5643514five period of Gastrodia elata10.090
SRR5643515five period of Gastrodia elata16.450
SRR5643524five period of Gastrodia elata11.410
SRR5643525five period of Gastrodia elata21.970
SRR5643528five period of Gastrodia elata19.140
SRR5643658five period of Gastrodia elata18.310
SRR5643659five period of Gastrodia elata9.870
SRR5643660five period of Gastrodia elata5.710
SRR5643661five period of Gastrodia elata6.900
SRR5643662five period of Gastrodia elata7.540
SRR5643663five period of Gastrodia elata7.810
SRR5643664five period of Gastrodia elata10.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.580
SRR6049655Rhizomagastrodiae_C368-T10_good_15.410
SRR6049656Rhizomagastrodiae_C368-T07_good_18.220
SRR6049657Rhizomagastrodiae_C368-T07_good_17.610
SRR6049658Rhizomagastrodiae_C368-T04_good_13.820
SRR6049659Rhizomagastrodiae_C368-T04_good_13.340
SRR6049660Rhizomagastrodiae_C368-T01_good_17.220
SRR6049661Rhizomagastrodiae_C368-T04_good_17.980
SRR6049662Rhizomagastrodiae_C368-T01_good_110.600
SRR6049663Rhizomagastrodiae_C368-T01_good_17.850
SRR6049664Rhizomagastrodiae_C368-T10_good_18.120
SRR6049665Rhizomagastrodiae_C368-T10_good_18.120
SRP279888GastroGastrodia elata tuber 5.04
JuvenJuvenile tuber4.22
Mother_GastroMother tuber of Gastrodia elata 6.50
Mother_JuvenMother tuber of Juvenile 3.73