Detail information of GWHGAAEX007213/evm.TU.scaffold_199.44
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|407462077|ref|YP_006773394.1| | 5.00E-25 | N-acetyltransferase GCN5 [Candidatus Nitrosopumilus koreensis AR1] |
| KOG | KOG3396 | 1.00E-56 | Glucosamine-phosphate N-acetyltransferase |
| nr | gi|672187903|ref|XP_008813450.1| | 3.10E-72 | PREDICTED: glucosamine 6-phosphate N-acetyltransferase-like [Phoenix dactylifera] |
| Swissprot | tr|Q5U9F2|GNA1_ORYSJ | 4.00E-61 | Glucosamine 6-phosphate N-acetyltransferase 1 |
| trEMBL | tr|D7TJ70|D7TJ70_VITVI | 3.00E-67 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI30296.3} |
| TAIR | AT5G15770 | 1.00E-56 | glucose-6-phosphate acetyltransferase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000202 | 957293 | 957760 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007213
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00583.24 | Acetyltransf_1 | 41 | 142 | 5.80E-14 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00621 | GNPNAT1, GNA1 | Metabolic pathways | map01100 |
| Amino sugar and nucleotide sugar metabolism | map00520 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008080 | Molecular Function | N-acetyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.410 |
| SRR2545915 | Juvenile tuber | 16.460 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.410 |
| SRR5643514 | five period of Gastrodia elata | 13.480 | |
| SRR5643515 | five period of Gastrodia elata | 10.060 | |
| SRR5643524 | five period of Gastrodia elata | 11.730 | |
| SRR5643525 | five period of Gastrodia elata | 12.530 | |
| SRR5643528 | five period of Gastrodia elata | 20.400 | |
| SRR5643658 | five period of Gastrodia elata | 10.350 | |
| SRR5643659 | five period of Gastrodia elata | 10.750 | |
| SRR5643660 | five period of Gastrodia elata | 11.670 | |
| SRR5643661 | five period of Gastrodia elata | 8.940 | |
| SRR5643662 | five period of Gastrodia elata | 11.160 | |
| SRR5643663 | five period of Gastrodia elata | 7.740 | |
| SRR5643664 | five period of Gastrodia elata | 9.200 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 7.690 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 5.290 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 17.100 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 17.170 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 7.090 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 14.650 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 11.060 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 11.090 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 7.900 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 14.360 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 12.580 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 12.580 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 17.91 |
| Juven | Juvenile tuber | 10.25 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 39.15 | |
| Mother_Juven | Mother tuber of Juvenile | 10.56 |