Detail information of GWHGAAEX007223/evm.TU.scaffold_199.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|261416483|ref|YP_003250166.1|0glycogen/starch/alpha-glucan phosphorylase [Fibrobacter succinogenes subsp. succinogenes S85]
KOGKOG20990Glycogen phosphorylase
nrgi|743790326|ref|XP_010923139.1|0PREDICTED: LOW QUALITY PROTEIN: alpha-glucan phosphorylase, H isozyme-like [Elaeis guineensis]
Swissprottr|P32811|PHSH_SOLTU0Alpha-glucan phosphorylase, H isozyme
trEMBLtr|M0TCH7|M0TCH7_MUSAM0Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}
TAIRAT3G469700alpha-glucan phosphorylase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000020210832561090476-
Transcript Sequence

Network for GWHGAAEX007223

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00343.19Phosphorylase26238.50E-246
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00688PYG, glgP Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500
Necroptosismap04217
Biofilm formation - Escherichia colimap02026
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0030170Molecular Functionpyridoxal phosphate binding
GO:0008184Molecular Functionglycogen phosphorylase activity
GO:0004645Molecular Functionphosphorylase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms69.390
SRR2545915Juvenile tuber101.610
SRP108465SRR5643513five period of Gastrodia elata83.190
SRR5643514five period of Gastrodia elata104.440
SRR5643515five period of Gastrodia elata89.720
SRR5643524five period of Gastrodia elata99.290
SRR5643525five period of Gastrodia elata56.380
SRR5643528five period of Gastrodia elata49.000
SRR5643658five period of Gastrodia elata57.070
SRR5643659five period of Gastrodia elata111.940
SRR5643660five period of Gastrodia elata111.080
SRR5643661five period of Gastrodia elata118.030
SRR5643662five period of Gastrodia elata135.360
SRR5643663five period of Gastrodia elata149.000
SRR5643664five period of Gastrodia elata146.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1111.160
SRR6049655Rhizomagastrodiae_C368-T10_good_166.710
SRR6049656Rhizomagastrodiae_C368-T07_good_1103.240
SRR6049657Rhizomagastrodiae_C368-T07_good_1105.200
SRR6049658Rhizomagastrodiae_C368-T04_good_177.020
SRR6049659Rhizomagastrodiae_C368-T04_good_179.100
SRR6049660Rhizomagastrodiae_C368-T01_good_177.010
SRR6049661Rhizomagastrodiae_C368-T04_good_183.300
SRR6049662Rhizomagastrodiae_C368-T01_good_186.080
SRR6049663Rhizomagastrodiae_C368-T01_good_174.800
SRR6049664Rhizomagastrodiae_C368-T10_good_190.920
SRR6049665Rhizomagastrodiae_C368-T10_good_190.920
SRP279888GastroGastrodia elata tuber 93.97
JuvenJuvenile tuber103.76
Mother_GastroMother tuber of Gastrodia elata 38.75
Mother_JuvenMother tuber of Juvenile 70.42