Detail information of GWHGAAEX007230/evm.TU.scaffold_199.61


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15613142|ref|NP_241445.1|2.00E-29cytochrome P450 hydroxylase [Bacillus halodurans C-125]
KOGKOG01570Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
nrgi|721646213|ref|XP_003564640.2|0PREDICTED: cytochrome P450 86A1 [Brachypodium distachyon]
Swissprottr|P48422|C86A1_ARATH0Cytochrome P450 86A1
trEMBLtr|I1HTH6|I1HTH6_BRADI0Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI2G55280.1}
TAIRAT5G588600cytochrome P450, family 86, subfamily A, polypeptide 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000020211935511195289-
Transcript Sequence

Network for GWHGAAEX007230

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.21p450284861.10E-60
Protein Sequence

Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP86

KEGG pathway

KO Enzyme pathway mapID
K15401CYP86A1 Fatty acid degradation map00071
Synthesis and degradation of ketone bodiesmap00072

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0005506Molecular Functioniron ion binding
GO:0020037Molecular Functionheme binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.160
SRR2545915Juvenile tuber11.980
SRP108465SRR5643513five period of Gastrodia elata27.050
SRR5643514five period of Gastrodia elata12.680
SRR5643515five period of Gastrodia elata5.080
SRR5643524five period of Gastrodia elata7.470
SRR5643525five period of Gastrodia elata1.780
SRR5643528five period of Gastrodia elata0.050
SRR5643658five period of Gastrodia elata0.670
SRR5643659five period of Gastrodia elata1.470
SRR5643660five period of Gastrodia elata0.820
SRR5643661five period of Gastrodia elata0.380
SRR5643662five period of Gastrodia elata0.660
SRR5643663five period of Gastrodia elata0.160
SRR5643664five period of Gastrodia elata0.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.050
SRR6049655Rhizomagastrodiae_C368-T10_good_124.900
SRR6049656Rhizomagastrodiae_C368-T07_good_133.410
SRR6049657Rhizomagastrodiae_C368-T07_good_124.740
SRR6049658Rhizomagastrodiae_C368-T04_good_114.860
SRR6049659Rhizomagastrodiae_C368-T04_good_111.130
SRR6049660Rhizomagastrodiae_C368-T01_good_118.290
SRR6049661Rhizomagastrodiae_C368-T04_good_128.310
SRR6049662Rhizomagastrodiae_C368-T01_good_117.540
SRR6049663Rhizomagastrodiae_C368-T01_good_110.710
SRR6049664Rhizomagastrodiae_C368-T10_good_138.210
SRR6049665Rhizomagastrodiae_C368-T10_good_138.210
SRP279888GastroGastrodia elata tuber 2.24
JuvenJuvenile tuber0.38
Mother_GastroMother tuber of Gastrodia elata 3.07
Mother_JuvenMother tuber of Juvenile 2.12