Detail information of GWHGAAEX007233/evm.TU.scaffold_199.64


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG27142.00E-163SETA binding protein SB1 and related proteins, contain BTB/POZ domain
nrgi|695043579|ref|XP_009409489.1|0PREDICTED: BTB/POZ domain-containing protein At3g09030 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9S7R7|Y3903_ARATH4.00E-164BTB/POZ domain-containing protein At3g09030
trEMBLtr|B9SZD2|B9SZD2_RICCO5.00E-173Protein binding protein, putative {ECO:0000313|EMBL:EEF31035.1}
TAIRAT3G090302.00E-163BTB/POZ domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000020212134181233675+
Transcript Sequence

Network for GWHGAAEX007233

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02214.21BTB_2801634.50E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0051260Biological Processprotein homooligomerization
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.250
SRR2545915Juvenile tuber12.740
SRP108465SRR5643513five period of Gastrodia elata31.630
SRR5643514five period of Gastrodia elata20.420
SRR5643515five period of Gastrodia elata29.640
SRR5643524five period of Gastrodia elata23.240
SRR5643525five period of Gastrodia elata26.820
SRR5643528five period of Gastrodia elata22.400
SRR5643658five period of Gastrodia elata20.890
SRR5643659five period of Gastrodia elata37.420
SRR5643660five period of Gastrodia elata39.220
SRR5643661five period of Gastrodia elata40.960
SRR5643662five period of Gastrodia elata54.920
SRR5643663five period of Gastrodia elata41.230
SRR5643664five period of Gastrodia elata33.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.680
SRR6049655Rhizomagastrodiae_C368-T10_good_137.420
SRR6049656Rhizomagastrodiae_C368-T07_good_126.670
SRR6049657Rhizomagastrodiae_C368-T07_good_125.870
SRR6049658Rhizomagastrodiae_C368-T04_good_129.180
SRR6049659Rhizomagastrodiae_C368-T04_good_126.980
SRR6049660Rhizomagastrodiae_C368-T01_good_125.440
SRR6049661Rhizomagastrodiae_C368-T04_good_127.150
SRR6049662Rhizomagastrodiae_C368-T01_good_130.020
SRR6049663Rhizomagastrodiae_C368-T01_good_127.400
SRR6049664Rhizomagastrodiae_C368-T10_good_134.680
SRR6049665Rhizomagastrodiae_C368-T10_good_134.680
SRP279888GastroGastrodia elata tuber 34.64
JuvenJuvenile tuber35.43
Mother_GastroMother tuber of Gastrodia elata 36.68
Mother_JuvenMother tuber of Juvenile 26.96