Detail information of GWHGAAEX007237/evm.TU.scaffold_199.71


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428218091|ref|YP_007102556.1|5.00E-41ABC-1 domain-containing protein [Pseudanabaena sp. PCC 7367]
KOGKOG12350Predicted unusual protein kinase
nrgi|743789926|ref|XP_010923039.1|0PREDICTED: putative ABC1 protein At2g40090 isoform X1 [Elaeis guineensis]
Swissprottr|O04212|Y2090_ARATH0Putative ABC1 protein At2g40090 (Precursor)
trEMBLtr|M0SFH9|M0SFH9_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P17630_001}
TAIRAT2G400900ABC2 homolog 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000020213623481462644-
Transcript Sequence

Network for GWHGAAEX007237

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03109.15ABC11422631.10E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.140
SRR2545915Juvenile tuber39.050
SRP108465SRR5643513five period of Gastrodia elata23.420
SRR5643514five period of Gastrodia elata25.230
SRR5643515five period of Gastrodia elata21.300
SRR5643524five period of Gastrodia elata22.650
SRR5643525five period of Gastrodia elata30.060
SRR5643528five period of Gastrodia elata26.520
SRR5643658five period of Gastrodia elata27.940
SRR5643659five period of Gastrodia elata19.660
SRR5643660five period of Gastrodia elata20.580
SRR5643661five period of Gastrodia elata20.200
SRR5643662five period of Gastrodia elata20.810
SRR5643663five period of Gastrodia elata20.750
SRR5643664five period of Gastrodia elata18.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.190
SRR6049655Rhizomagastrodiae_C368-T10_good_129.860
SRR6049656Rhizomagastrodiae_C368-T07_good_125.910
SRR6049657Rhizomagastrodiae_C368-T07_good_124.540
SRR6049658Rhizomagastrodiae_C368-T04_good_130.110
SRR6049659Rhizomagastrodiae_C368-T04_good_131.070
SRR6049660Rhizomagastrodiae_C368-T01_good_126.840
SRR6049661Rhizomagastrodiae_C368-T04_good_127.660
SRR6049662Rhizomagastrodiae_C368-T01_good_123.280
SRR6049663Rhizomagastrodiae_C368-T01_good_128.460
SRR6049664Rhizomagastrodiae_C368-T10_good_131.160
SRR6049665Rhizomagastrodiae_C368-T10_good_131.160
SRP279888GastroGastrodia elata tuber 19.62
JuvenJuvenile tuber28.86
Mother_GastroMother tuber of Gastrodia elata 15.56
Mother_JuvenMother tuber of Juvenile 22.57