Detail information of GWHGAAEX007238/evm.TU.scaffold_2.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|152980154|ref|YP_001353562.1|9.00E-105alcohol dehydrogenase [Janthinobacterium sp. Marseille]
KOGKOG00231.00E-160Alcohol dehydrogenase, class V
nrgi|743861182|ref|XP_010943210.1|0PREDICTED: cinnamyl alcohol dehydrogenase 2-like [Elaeis guineensis]
Swissprottr|O64969|CADH_EUCGL1.00E-176Probable cinnamyl alcohol dehydrogenase
trEMBLtr|B5AMJ6|B5AMJ6_GOSHI8.00E-180Cinnamyl alcohol dehydrogenase {ECO:0000313|EMBL:ACF71455.1}
TAIRAT3G194501.00E-160GroES-like zinc-binding alcohol dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001047156563+
Transcript Sequence

Network for GWHGAAEX007238

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08240.11ADH_N361503.00E-26
PF00107.25ADH_zinc_N1923151.00E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00083CAD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.390
SRR2545915Juvenile tuber76.870
SRP108465SRR5643513five period of Gastrodia elata249.090
SRR5643514five period of Gastrodia elata118.680
SRR5643515five period of Gastrodia elata164.640
SRR5643524five period of Gastrodia elata149.760
SRR5643525five period of Gastrodia elata1701.940
SRR5643528five period of Gastrodia elata900.800
SRR5643658five period of Gastrodia elata1941.160
SRR5643659five period of Gastrodia elata106.300
SRR5643660five period of Gastrodia elata78.440
SRR5643661five period of Gastrodia elata99.050
SRR5643662five period of Gastrodia elata130.570
SRR5643663five period of Gastrodia elata191.350
SRR5643664five period of Gastrodia elata179.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1138.540
SRR6049655Rhizomagastrodiae_C368-T10_good_1179.630
SRR6049656Rhizomagastrodiae_C368-T07_good_1158.870
SRR6049657Rhizomagastrodiae_C368-T07_good_1102.110
SRR6049658Rhizomagastrodiae_C368-T04_good_150.950
SRR6049659Rhizomagastrodiae_C368-T04_good_149.170
SRR6049660Rhizomagastrodiae_C368-T01_good_149.780
SRR6049661Rhizomagastrodiae_C368-T04_good_150.260
SRR6049662Rhizomagastrodiae_C368-T01_good_195.470
SRR6049663Rhizomagastrodiae_C368-T01_good_168.490
SRR6049664Rhizomagastrodiae_C368-T10_good_1206.250
SRR6049665Rhizomagastrodiae_C368-T10_good_1206.250
SRP279888GastroGastrodia elata tuber 139.73
JuvenJuvenile tuber86.90
Mother_GastroMother tuber of Gastrodia elata 268.59
Mother_JuvenMother tuber of Juvenile 562.05