Detail information of GWHGAAEX007245/evm.TU.scaffold_2.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695015353|ref|XP_009394542.1|1.25E-107PREDICTED: protein TIC 21, chloroplastic-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SHU7|TIC21_ARATH8.00E-97Protein TIC 21, chloroplastic (Precursor)
trEMBLtr|M0SIJ0|M0SIJ0_MUSAM4.00E-107Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P28240_001}
TAIRAT2G152903.00E-96translocon at inner membrane of chloroplasts 21

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000010168564206877+
Transcript Sequence

Network for GWHGAAEX007245

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12263.7DUF36111273002.10E-52
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.950
SRR2545915Juvenile tuber23.490
SRP108465SRR5643513five period of Gastrodia elata37.930
SRR5643514five period of Gastrodia elata40.960
SRR5643515five period of Gastrodia elata41.180
SRR5643524five period of Gastrodia elata40.300
SRR5643525five period of Gastrodia elata25.190
SRR5643528five period of Gastrodia elata25.240
SRR5643658five period of Gastrodia elata21.010
SRR5643659five period of Gastrodia elata41.790
SRR5643660five period of Gastrodia elata40.090
SRR5643661five period of Gastrodia elata46.210
SRR5643662five period of Gastrodia elata40.370
SRR5643663five period of Gastrodia elata44.140
SRR5643664five period of Gastrodia elata37.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_139.900
SRR6049655Rhizomagastrodiae_C368-T10_good_157.010
SRR6049656Rhizomagastrodiae_C368-T07_good_149.850
SRR6049657Rhizomagastrodiae_C368-T07_good_132.870
SRR6049658Rhizomagastrodiae_C368-T04_good_132.160
SRR6049659Rhizomagastrodiae_C368-T04_good_127.090
SRR6049660Rhizomagastrodiae_C368-T01_good_133.450
SRR6049661Rhizomagastrodiae_C368-T04_good_133.760
SRR6049662Rhizomagastrodiae_C368-T01_good_150.260
SRR6049663Rhizomagastrodiae_C368-T01_good_140.630
SRR6049664Rhizomagastrodiae_C368-T10_good_151.910
SRR6049665Rhizomagastrodiae_C368-T10_good_151.910
SRP279888GastroGastrodia elata tuber 42.23
JuvenJuvenile tuber51.38
Mother_GastroMother tuber of Gastrodia elata 18.38
Mother_JuvenMother tuber of Juvenile 30.42