Detail information of GWHGAAEX007249/evm.TU.scaffold_2.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|88604358|ref|YP_504536.1|2.00E-27peptidase C1A, papain [Methanospirillum hungatei JF-1]
KOGKOG15439.00E-156Cysteine proteinase Cathepsin L
nrgi|672189339|ref|XP_008813817.1|0PREDICTED: low-temperature-induced cysteine proteinase-like [Phoenix dactylifera]
Swissprottr|P25776|ORYA_ORYSJ0Oryzain alpha chain (Precursor)
trEMBLtr|A5HIJ6|A5HIJ6_ACTDE0Cysteine protease Cp6 {ECO:0000313|EMBL:ABQ10204.1}
TAIRAT5G43060_19.00E-156Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000010352354354583+
Transcript Sequence

Network for GWHGAAEX007249

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08246.11Inhibitor_I2955947.60E-12
PF00112.22Peptidase_C11233387.50E-84
PF00396.17Granulin3724191.40E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008234Molecular Functioncysteine-type peptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms275.160
SRR2545915Juvenile tuber156.280
SRP108465SRR5643513five period of Gastrodia elata777.430
SRR5643514five period of Gastrodia elata790.290
SRR5643515five period of Gastrodia elata619.270
SRR5643524five period of Gastrodia elata825.290
SRR5643525five period of Gastrodia elata3251.190
SRR5643528five period of Gastrodia elata2514.230
SRR5643658five period of Gastrodia elata3482.040
SRR5643659five period of Gastrodia elata150.890
SRR5643660five period of Gastrodia elata172.170
SRR5643661five period of Gastrodia elata172.590
SRR5643662five period of Gastrodia elata293.370
SRR5643663five period of Gastrodia elata232.270
SRR5643664five period of Gastrodia elata348.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1507.140
SRR6049655Rhizomagastrodiae_C368-T10_good_1540.510
SRR6049656Rhizomagastrodiae_C368-T07_good_1614.400
SRR6049657Rhizomagastrodiae_C368-T07_good_1622.940
SRR6049658Rhizomagastrodiae_C368-T04_good_1795.510
SRR6049659Rhizomagastrodiae_C368-T04_good_1982.020
SRR6049660Rhizomagastrodiae_C368-T01_good_1648.010
SRR6049661Rhizomagastrodiae_C368-T04_good_1746.010
SRR6049662Rhizomagastrodiae_C368-T01_good_1526.400
SRR6049663Rhizomagastrodiae_C368-T01_good_1560.180
SRR6049664Rhizomagastrodiae_C368-T10_good_1516.340
SRR6049665Rhizomagastrodiae_C368-T10_good_1516.340
SRP279888GastroGastrodia elata tuber 260.70
JuvenJuvenile tuber475.73
Mother_GastroMother tuber of Gastrodia elata 2,018.62
Mother_JuvenMother tuber of Juvenile 1,047.68