Detail information of GWHGAAEX007262/evm.TU.scaffold_2.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG20271.00E-94Spindle pole body protein
nrgi|743757340|ref|XP_010921566.1|1.31E-114PREDICTED: IST1 homolog isoform X2 [Elaeis guineensis]
trEMBLtr|W5DDM3|W5DDM3_WHEAT4.00E-107Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_3DL_CB1ED2AE3.1}
TAIRAT1G254201.00E-94Regulator of Vps4 activity in the MVB pathway protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001011064441138757-
Transcript Sequence

Network for GWHGAAEX007262

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03398.13Ist1181813.50E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19476IST1 Endocytosis map04144

Gene Ontology

GO term OntologyName
GO:0015031Biological Processprotein transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.180
SRR2545915Juvenile tuber15.490
SRP108465SRR5643513five period of Gastrodia elata14.020
SRR5643514five period of Gastrodia elata18.100
SRR5643515five period of Gastrodia elata12.790
SRR5643524five period of Gastrodia elata16.590
SRR5643525five period of Gastrodia elata22.290
SRR5643528five period of Gastrodia elata22.550
SRR5643658five period of Gastrodia elata29.020
SRR5643659five period of Gastrodia elata12.350
SRR5643660five period of Gastrodia elata10.700
SRR5643661five period of Gastrodia elata12.160
SRR5643662five period of Gastrodia elata10.160
SRR5643663five period of Gastrodia elata11.960
SRR5643664five period of Gastrodia elata11.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.770
SRR6049655Rhizomagastrodiae_C368-T10_good_124.260
SRR6049656Rhizomagastrodiae_C368-T07_good_118.840
SRR6049657Rhizomagastrodiae_C368-T07_good_118.570
SRR6049658Rhizomagastrodiae_C368-T04_good_120.460
SRR6049659Rhizomagastrodiae_C368-T04_good_124.310
SRR6049660Rhizomagastrodiae_C368-T01_good_118.760
SRR6049661Rhizomagastrodiae_C368-T04_good_119.620
SRR6049662Rhizomagastrodiae_C368-T01_good_121.970
SRR6049663Rhizomagastrodiae_C368-T01_good_120.720
SRR6049664Rhizomagastrodiae_C368-T10_good_120.950
SRR6049665Rhizomagastrodiae_C368-T10_good_120.950
SRP279888GastroGastrodia elata tuber 20.09
JuvenJuvenile tuber25.10
Mother_GastroMother tuber of Gastrodia elata 16.10
Mother_JuvenMother tuber of Juvenile 15.53