Detail information of GWHGAAEX007263/evm.TU.scaffold_2.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743772148|ref|XP_010916375.1|2.35E-109PREDICTED: NAC domain-containing protein 100 [Elaeis guineensis]
Swissprottr|O04017|NAC98_ARATH5.00E-78Protein CUP-SHAPED COTYLEDON 2
trEMBLtr|A0A060CXK9|A0A060CXK9_MAIZE2.00E-102NAC transcription factor {ECO:0000313|EMBL:AIB05251.1} (Fragment)
TAIRAT3G184002.00E-89NAC domain containing protein 58

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001011927721193951+
Transcript Sequence

Network for GWHGAAEX007263

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM81324.10E-37
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.870
SRR2545915Juvenile tuber17.720
SRP108465SRR5643513five period of Gastrodia elata10.020
SRR5643514five period of Gastrodia elata5.710
SRR5643515five period of Gastrodia elata3.750
SRR5643524five period of Gastrodia elata3.040
SRR5643525five period of Gastrodia elata1.100
SRR5643528five period of Gastrodia elata1.470
SRR5643658five period of Gastrodia elata0.520
SRR5643659five period of Gastrodia elata0.140
SRR5643660five period of Gastrodia elata0.230
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.150
SRR5643663five period of Gastrodia elata0.120
SRR5643664five period of Gastrodia elata0.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.940
SRR6049655Rhizomagastrodiae_C368-T10_good_110.570
SRR6049656Rhizomagastrodiae_C368-T07_good_18.190
SRR6049657Rhizomagastrodiae_C368-T07_good_17.410
SRR6049658Rhizomagastrodiae_C368-T04_good_16.170
SRR6049659Rhizomagastrodiae_C368-T04_good_13.810
SRR6049660Rhizomagastrodiae_C368-T01_good_15.190
SRR6049661Rhizomagastrodiae_C368-T04_good_17.410
SRR6049662Rhizomagastrodiae_C368-T01_good_15.090
SRR6049663Rhizomagastrodiae_C368-T01_good_13.030
SRR6049664Rhizomagastrodiae_C368-T10_good_18.460
SRR6049665Rhizomagastrodiae_C368-T10_good_18.460
SRP279888GastroGastrodia elata tuber 0.29
JuvenJuvenile tuber0.13
Mother_GastroMother tuber of Gastrodia elata 1.43
Mother_JuvenMother tuber of Juvenile 0.78