Detail information of GWHGAAEX007295/evm.TU.scaffold_2.81
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|743766041|ref|XP_010913249.1| | 8.00E-102 | PREDICTED: probable WRKY transcription factor 2 [Elaeis guineensis] |
| Swissprot | tr|O65590|WRK34_ARATH | 2.00E-70 | Probable WRKY transcription factor 34 |
| trEMBL | tr|M0RQY1|M0RQY1_MUSAM | 5.00E-91 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P10010_001} |
| trEMBL | tr|M0RQY1|M0RQY1_MUSAM | 4.00E-13 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P10010_001} |
| trEMBL | tr|M0RQY1|M0RQY1_MUSAM | 8.00E-13 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P10010_001} |
| TAIR | AT4G26440 | 6.00E-70 | WRKY DNA-binding protein 34 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000010 | 3291919 | 3298979 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007295
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03106.14 | WRKY | 372 | 428 | 2.10E-23 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K18835 | WRKY2 | Plant-pathogen interaction | map04626 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 27.590 |
| SRR2545915 | Juvenile tuber | 22.520 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 12.870 |
| SRR5643514 | five period of Gastrodia elata | 13.040 | |
| SRR5643515 | five period of Gastrodia elata | 11.350 | |
| SRR5643524 | five period of Gastrodia elata | 13.610 | |
| SRR5643525 | five period of Gastrodia elata | 10.640 | |
| SRR5643528 | five period of Gastrodia elata | 7.150 | |
| SRR5643658 | five period of Gastrodia elata | 13.000 | |
| SRR5643659 | five period of Gastrodia elata | 18.280 | |
| SRR5643660 | five period of Gastrodia elata | 23.410 | |
| SRR5643661 | five period of Gastrodia elata | 17.510 | |
| SRR5643662 | five period of Gastrodia elata | 15.800 | |
| SRR5643663 | five period of Gastrodia elata | 22.790 | |
| SRR5643664 | five period of Gastrodia elata | 22.850 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 34.020 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 21.370 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 27.950 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 44.110 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 42.740 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 41.030 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 37.870 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 41.750 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.620 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 29.160 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 16.220 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 16.220 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 29.45 |
| Juven | Juvenile tuber | 23.22 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 31.44 | |
| Mother_Juven | Mother tuber of Juvenile | 16.58 |