Detail information of GWHGAAEX007297/evm.TU.scaffold_2.82


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG46730Transcription factor TMF, TATA element modulatory factor
nrgi|743795843|ref|XP_010924581.1|0PREDICTED: golgin candidate 5-like isoform X1 [Elaeis guineensis]
Swissprottr|Q0WVL7|GOGC5_ARATH0Golgin candidate 5
trEMBLtr|M0SWZ8|M0SWZ8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P09190_001}
TAIRAT1G798300golgin candidate 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001033260623373656-
Transcript Sequence

Network for GWHGAAEX007297

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12329.7TMF_DNA_bd4335011.20E-13
PF12325.7TMF_TATA_bd8469528.90E-30
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms50.040
SRR2545915Juvenile tuber53.070
SRP108465SRR5643513five period of Gastrodia elata21.240
SRR5643514five period of Gastrodia elata22.790
SRR5643515five period of Gastrodia elata20.820
SRR5643524five period of Gastrodia elata24.090
SRR5643525five period of Gastrodia elata30.770
SRR5643528five period of Gastrodia elata29.360
SRR5643658five period of Gastrodia elata35.590
SRR5643659five period of Gastrodia elata17.200
SRR5643660five period of Gastrodia elata19.390
SRR5643661five period of Gastrodia elata17.960
SRR5643662five period of Gastrodia elata19.330
SRR5643663five period of Gastrodia elata19.240
SRR5643664five period of Gastrodia elata18.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.990
SRR6049655Rhizomagastrodiae_C368-T10_good_121.660
SRR6049656Rhizomagastrodiae_C368-T07_good_125.080
SRR6049657Rhizomagastrodiae_C368-T07_good_125.650
SRR6049658Rhizomagastrodiae_C368-T04_good_127.340
SRR6049659Rhizomagastrodiae_C368-T04_good_133.230
SRR6049660Rhizomagastrodiae_C368-T01_good_128.190
SRR6049661Rhizomagastrodiae_C368-T04_good_127.800
SRR6049662Rhizomagastrodiae_C368-T01_good_122.190
SRR6049663Rhizomagastrodiae_C368-T01_good_123.350
SRR6049664Rhizomagastrodiae_C368-T10_good_123.970
SRR6049665Rhizomagastrodiae_C368-T10_good_123.970
SRP279888GastroGastrodia elata tuber 22.90
JuvenJuvenile tuber28.07
Mother_GastroMother tuber of Gastrodia elata 23.31
Mother_JuvenMother tuber of Juvenile 28.21