Detail information of GWHGAAEX007299/evm.TU.scaffold_2.87


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695066725|ref|XP_009380261.1|9.54E-125PREDICTED: DNA ligase 1 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0RJM5|M0RJM5_MUSAM7.00E-106Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P19500_001}
TAIRAT4G083103.00E-83Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001035872543629112+
Transcript Sequence

Network for GWHGAAEX007299

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09649.9CHZ4094371.40E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.940
SRR2545915Juvenile tuber22.390
SRP108465SRR5643513five period of Gastrodia elata22.960
SRR5643514five period of Gastrodia elata15.300
SRR5643515five period of Gastrodia elata18.320
SRR5643524five period of Gastrodia elata15.650
SRR5643525five period of Gastrodia elata15.000
SRR5643528five period of Gastrodia elata15.200
SRR5643658five period of Gastrodia elata10.310
SRR5643659five period of Gastrodia elata19.770
SRR5643660five period of Gastrodia elata18.480
SRR5643661five period of Gastrodia elata17.220
SRR5643662five period of Gastrodia elata17.280
SRR5643663five period of Gastrodia elata17.050
SRR5643664five period of Gastrodia elata15.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.770
SRR6049655Rhizomagastrodiae_C368-T10_good_121.310
SRR6049656Rhizomagastrodiae_C368-T07_good_118.650
SRR6049657Rhizomagastrodiae_C368-T07_good_122.310
SRR6049658Rhizomagastrodiae_C368-T04_good_118.070
SRR6049659Rhizomagastrodiae_C368-T04_good_119.160
SRR6049660Rhizomagastrodiae_C368-T01_good_119.320
SRR6049661Rhizomagastrodiae_C368-T04_good_117.530
SRR6049662Rhizomagastrodiae_C368-T01_good_117.180
SRR6049663Rhizomagastrodiae_C368-T01_good_116.410
SRR6049664Rhizomagastrodiae_C368-T10_good_119.800
SRR6049665Rhizomagastrodiae_C368-T10_good_119.800
SRP279888GastroGastrodia elata tuber 17.80
JuvenJuvenile tuber34.38
Mother_GastroMother tuber of Gastrodia elata 18.54
Mother_JuvenMother tuber of Juvenile 35.20