Detail information of GWHGAAEX007300/evm.TU.scaffold_2.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672118073|ref|XP_008782236.1|1.07E-13PREDICTED: uncharacterized protein LOC103701824 [Phoenix dactylifera]
trEMBLtr|C5XSX0|C5XSX0_SORBI2.00E-06Putative uncharacterized protein Sb04g034350 {ECO:0000313|EMBL:EES07592.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001037286643730298+
Transcript Sequence

Network for GWHGAAEX007300

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04504.13DUF5731031878.60E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGeBP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms67.170
SRR2545915Juvenile tuber63.580
SRP108465SRR5643513five period of Gastrodia elata40.600
SRR5643514five period of Gastrodia elata41.160
SRR5643515five period of Gastrodia elata37.570
SRR5643524five period of Gastrodia elata37.990
SRR5643525five period of Gastrodia elata56.710
SRR5643528five period of Gastrodia elata59.520
SRR5643658five period of Gastrodia elata51.250
SRR5643659five period of Gastrodia elata67.080
SRR5643660five period of Gastrodia elata76.450
SRR5643661five period of Gastrodia elata64.740
SRR5643662five period of Gastrodia elata69.970
SRR5643663five period of Gastrodia elata68.870
SRR5643664five period of Gastrodia elata74.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_162.050
SRR6049655Rhizomagastrodiae_C368-T10_good_161.930
SRR6049656Rhizomagastrodiae_C368-T07_good_148.850
SRR6049657Rhizomagastrodiae_C368-T07_good_162.170
SRR6049658Rhizomagastrodiae_C368-T04_good_149.790
SRR6049659Rhizomagastrodiae_C368-T04_good_159.280
SRR6049660Rhizomagastrodiae_C368-T01_good_153.300
SRR6049661Rhizomagastrodiae_C368-T04_good_148.800
SRR6049662Rhizomagastrodiae_C368-T01_good_145.040
SRR6049663Rhizomagastrodiae_C368-T01_good_142.400
SRR6049664Rhizomagastrodiae_C368-T10_good_156.700
SRR6049665Rhizomagastrodiae_C368-T10_good_156.700
SRP279888GastroGastrodia elata tuber 49.73
JuvenJuvenile tuber61.00
Mother_GastroMother tuber of Gastrodia elata 28.45
Mother_JuvenMother tuber of Juvenile 50.17