Gene detail

Detail information of GWHGAAEX007306/evm.TU.scaffold_2.102

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743842229\|ref\|XP_010937749.1\|	0	PREDICTED: myosin-8 [Elaeis guineensis]
trEMBL	tr\|B8AZ19\|B8AZ19_ORYSI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:EEC79372.1}
TAIR	AT1G58210	5.00E-144	kinase interacting family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000010	4202608	4229289	-

Transcript Sequence
>GWHTAAEX007306 ATGTTGCGGAGAGCGGCGAGCAATGCGTACTCGTGGTGGTGGGCGAGCCATATTCGCACCAGTCAGTCTAAATGGCTTGAAAACATTATTCGCGAGATGGACGACCGAGTTAAGGCCATGCTGAAGATTATTGAAGAAGATGCAGATTCATTTTCAAAAAAGGCAGAGTTGTACTTCAAGAAGAGGCCTGAGCTTATAAAACTTGTGGAAGAGACATACAGAGCTTATAGAGCATTAGCTGAAAGATATGATCACATTTCAGGGGAGTTGCACAAGGCCAACCATACCATAGCTACTGCTTTTCCGGACCAGGTGCAGATTGATGTGCAAGAGGATGACGGAGATCATTTACCTAAAGCAATTACATCAATAGACTTCAGTAGATTAAGTAGGCTAGCCTTAGATATTTCTCGGGATAGCTTGAAAAGTGAAAAAAAGGGAAACCCATCCTTTAATAGGCCTCATCCTCACCTCAAGATTGACAGGAGGAGAGTACCTGAGGAGATAGACAGAATCCAGAAGGAAATTTTAGTTCTTCAGACCGAAAAGGAATTCATTAGAAGTTCCTATGAAAATGCGATTGCCAGATACCAGGAGATCGAAAATCAGATTGCATCAATGCAAGACGAACTTTGTCTTCTGCAAGATGAGTTTGGCGACAGTGTTTCAATTGAAGATGATGAAGCCCGCACCCTGATGGCAACAGCTGCTCTTAAGTCCTGCGAGGATACCTTATTTAGCTTACAGGAAAATCATAGAAGATCTGTAGAATTCACTAGGATTGGATCCAAGAAAATAATGATGGCTAAAGAGAAGCTCAAATCTTTCAAGCAAGGTTCCGAAGAGAACAGAATAATCTCTGAAAAGAGTGACAGCACAAATTTGAGTGCAGTTGTTGTAGACGATGTTCCCGTTTCCAAACTGGATCAAATATCTGTTCAAATCGGTCCTAATATGTCTCTAATTGAACTCGCTGAGAAAATTAATGAAGTTGTCGACAAAGTCATTACTTTAGAGCTTACAACTTCTTCTCAGAATGCACAAATAGAAAATTTAAGATCAGAAACTGATGAACTTCACAAACATGTGGAGAGCTTAGAAGAGGAGAAACTGACTTTGATTCAGGACTCGGGTAGTTTGAGTGACAGATTAAAGCAAACAGAAGAGGAATTACAGAAAATTCAGGATATTAATAAAGTTTCTTGTGGTGCTAAGGACGATGCTTCCACAATTTTAAATGATGCGCCGCTTGATGGCGCCTCTAATTTAGAGAAACTGCAGCATCTCAAACATGAGGCTAAAGTTGCATTTTACTCTCAAGAGGAAGAGATAGCTCATCCCATCACAGAACCTCTAATGTCTCAAGATAAAGAAATTGAGGAAATGGATGATCGAACGGGTGTTTCAATTTCCGATGTCACTAATGAAATTTATGGAACTGAGGATTCTACCTCTCTGTTAAGTATAGCGTCTGGGGGTCAATTGCTTCTGCAAGATGATTCTCTTAACTTAATGCAGTCTTTATCAAAAGGTGCAGATGATAAAGAAAAGATCTTGTTGACAGAGTACATATCTATCCTACGCAATTACGAGCAAATAAAGAAGCGGCTTTTCGAGGTTGATCAGAAAAATCAAGCCTATGTTCTAGAGACAACAACACAGTTAGTGGAATTGAAGAAAGCTTATGATTTGAAGGATGAGGAACTTAGATCAATGCATCAATTACTCAGCAAACAGCAGAGGAACCCAAATGAAAATGAACCAGAAGTCTCAAATAAAGAGAAGAGCTTATCAAGCCTAAGAGGCCCTAGGATGTCTGATAGCGCGTCCTTCCAAGGTACTGTTAAAAAGGATTCAGAATATGAAGCTATAGATACCTTACAAACCGCTTCTCAAGTAGAGGAAAAGTTTCGAAGATACATTGATGCGCTCCTTGTCGAGAACTTGAATTTCTGGTTAAGATTCAGCTCTTCTTTCCAACAAATTCAAAAATTCCAATTTGAATTCGATGCTCTGCAAGCTGCATTCAAGAGGCTGGATGAGAGGAATTTTGAAGAGGATGGCGGCAGTGCTTCATCAGATTCTGAACCACTTGACAAGCAGCTGAGAGAATTAAAGACCGAGCTGCAGGTTTGGTTGGAGCAGAATGACTTGTTAGAAGGTGAATCTCAAACTAGATTCAAGTCTTTATGTAGCATACAAGAGGAGATTTCAGAAGCTCTTGCTACCAGTCTGGAATTTGACACAGTCAAGTTGTCGCCATACCAGGCAGCAAAATTTCAAGGAGAGGTCGCAAATATGCAGCACGAGAATTCTAAAGTTGCGAATGAACTGCAACTTGGTGTAGATCATGTAAGGGGCCTTCGAACTGAAGTGGAGAAGATCTTGTCAGAGTTTCAGAAGAAGTTTGAACTCTCCGGTTCTCAAGTAAGCAGGCAACACAACCGCCCCTTTAAGTATTTTTCGTCAAAAACTCACATTCCACTACGTAATTTTCTTTTCGGCGTCAAGCCGAAGAAGAAACCATCTATTTTTAAATGCATGAATCCTTCATATCAAAAGCAATACAGTGATCTTTCTTCAGGATTTCCTTCTTAG

Network for GWHGAAEX007306

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07765.11	KIP1	11	84	9.60E-35

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003779	Molecular Function	actin binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	48.970
SRP064423	SRR2545915	Juvenile tuber	32.460
SRP108465	SRR5643513	five period of Gastrodia elata	14.120
	SRR5643514	five period of Gastrodia elata	13.910
	SRR5643515	five period of Gastrodia elata	20.370
	SRR5643524	five period of Gastrodia elata	14.170
	SRR5643525	five period of Gastrodia elata	52.080
	SRR5643528	five period of Gastrodia elata	33.510
	SRR5643658	five period of Gastrodia elata	56.570
	SRR5643659	five period of Gastrodia elata	17.150
	SRR5643660	five period of Gastrodia elata	19.900
	SRR5643661	five period of Gastrodia elata	20.180
	SRR5643662	five period of Gastrodia elata	19.810
	SRR5643663	five period of Gastrodia elata	24.280
	SRR5643664	five period of Gastrodia elata	23.120
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.890
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.180
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	12.270
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	21.940
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	19.080
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	24.300
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	16.260
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	16.100
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.430
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.700
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.040
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.040
SRP279888	Gastro	Gastrodia elata tuber	15.20
	Juven	Juvenile tuber	13.41
	Mother_Gastro	Mother tuber of Gastrodia elata	18.07
	Mother_Juven	Mother tuber of Juvenile	18.46