Detail information of GWHGAAEX007327/evm.TU.scaffold_2.135
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG3365 | 2.00E-80 | NADH:ubiquinone oxidoreductase, NDUFA5/B13 subunit |
| nr | gi|672116012|ref|XP_008781156.1| | 3.25E-95 | PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Phoenix dactylifera] |
| Swissprot | tr|Q9FLX7|NDUA5_ARATH | 7.00E-81 | Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial (Precursor) |
| trEMBL | tr|M0RSP1|M0RSP1_MUSAM | 3.00E-87 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P16110_001} |
| TAIR | AT5G52840 | 2.00E-80 | NADH-ubiquinone oxidoreductase-related |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000010 | 5899333 | 5935566 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007327
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04716.13 | ETC_C1_NDUFA5 | 27 | 93 | 3.00E-26 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K03949 | NDUFA5 | Metabolic pathways | map01100 |
| Oxidative phosphorylation | map00190 | ||
| Retrograde endocannabinoid signaling | map04723 | ||
| Thermogenesis | map04714 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0022904 | Biological Process | respiratory electron transport chain |
| GO:0005747 | Cellular Component | mitochondrial respiratory chain complex I |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 128.340 |
| SRR2545915 | Juvenile tuber | 156.460 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 351.800 |
| SRR5643514 | five period of Gastrodia elata | 475.330 | |
| SRR5643515 | five period of Gastrodia elata | 385.230 | |
| SRR5643524 | five period of Gastrodia elata | 453.050 | |
| SRR5643525 | five period of Gastrodia elata | 485.620 | |
| SRR5643528 | five period of Gastrodia elata | 526.830 | |
| SRR5643658 | five period of Gastrodia elata | 420.930 | |
| SRR5643659 | five period of Gastrodia elata | 270.500 | |
| SRR5643660 | five period of Gastrodia elata | 283.020 | |
| SRR5643661 | five period of Gastrodia elata | 323.410 | |
| SRR5643662 | five period of Gastrodia elata | 288.700 | |
| SRR5643663 | five period of Gastrodia elata | 295.330 | |
| SRR5643664 | five period of Gastrodia elata | 303.730 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 270.020 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 388.300 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 329.690 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 233.170 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 199.360 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 200.030 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 193.820 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 209.550 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 296.440 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 234.810 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 464.130 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 464.130 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 269.03 |
| Juven | Juvenile tuber | 282.30 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 232.55 | |
| Mother_Juven | Mother tuber of Juvenile | 275.44 |