Detail information of GWHGAAEX007330/evm.TU.scaffold_2.138


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|1.00E-19hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOGKOG11874.00E-110Serine/threonine protein kinase
nrgi|672201032|ref|XP_008778027.1|2.02E-161PREDICTED: serine/threonine-protein kinase-like protein At3g51990 [Phoenix dactylifera]
Swissprottr|Q9SV05|CCR35_ARATH1.00E-110Serine/threonine-protein kinase-like protein At3g51990 (Precursor)
trEMBLtr|I1HJY3|I1HJY3_BRADI2.00E-138Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI2G26890.1}
TAIRAT3G519904.00E-110Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001060308926032648-
Transcript Sequence

Network for GWHGAAEX007330

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase663231.30E-34
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_CR4L

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.890
SRR2545915Juvenile tuber17.890
SRP108465SRR5643513five period of Gastrodia elata13.670
SRR5643514five period of Gastrodia elata15.300
SRR5643515five period of Gastrodia elata12.790
SRR5643524five period of Gastrodia elata14.620
SRR5643525five period of Gastrodia elata9.570
SRR5643528five period of Gastrodia elata12.050
SRR5643658five period of Gastrodia elata10.720
SRR5643659five period of Gastrodia elata8.600
SRR5643660five period of Gastrodia elata8.220
SRR5643661five period of Gastrodia elata9.450
SRR5643662five period of Gastrodia elata6.540
SRR5643663five period of Gastrodia elata5.380
SRR5643664five period of Gastrodia elata7.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.520
SRR6049655Rhizomagastrodiae_C368-T10_good_114.080
SRR6049656Rhizomagastrodiae_C368-T07_good_113.330
SRR6049657Rhizomagastrodiae_C368-T07_good_113.250
SRR6049658Rhizomagastrodiae_C368-T04_good_113.730
SRR6049659Rhizomagastrodiae_C368-T04_good_113.140
SRR6049660Rhizomagastrodiae_C368-T01_good_111.420
SRR6049661Rhizomagastrodiae_C368-T04_good_114.490
SRR6049662Rhizomagastrodiae_C368-T01_good_115.420
SRR6049663Rhizomagastrodiae_C368-T01_good_115.400
SRR6049664Rhizomagastrodiae_C368-T10_good_111.980
SRR6049665Rhizomagastrodiae_C368-T10_good_111.980
SRP279888GastroGastrodia elata tuber 7.80
JuvenJuvenile tuber10.33
Mother_GastroMother tuber of Gastrodia elata 29.81
Mother_JuvenMother tuber of Juvenile 14.38