Detail information of GWHGAAEX007331/evm.TU.scaffold_2.140
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0239 | 0 | Kinesin (KAR3 subfamily) |
| nr | gi|695078906|ref|XP_009386854.1| | 0 | PREDICTED: kinesin-4 isoform X1 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|O81635|ATK4_ARATH | 0 | Kinesin-4 |
| trEMBL | tr|A0A061EVV7|A0A061EVV7_THECC | 0 | Kinesin-like protein {ECO:0000256|RuleBase:RU000394} |
| TAIR | AT3G10310 | 0 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000010 | 6098162 | 6114263 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007331
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00307.30 | CH | 25 | 145 | 4.90E-14 |
| PF00225.22 | Kinesin | 398 | 687 | 1.50E-104 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0007018 | Biological Process | microtubule-based movement |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0003777 | Molecular Function | microtubule motor activity |
| GO:0008017 | Molecular Function | microtubule binding |
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.170 |
| SRR2545915 | Juvenile tuber | 0.150 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.840 |
| SRR5643514 | five period of Gastrodia elata | 1.880 | |
| SRR5643515 | five period of Gastrodia elata | 0.640 | |
| SRR5643524 | five period of Gastrodia elata | 1.140 | |
| SRR5643525 | five period of Gastrodia elata | 0.130 | |
| SRR5643528 | five period of Gastrodia elata | 0.250 | |
| SRR5643658 | five period of Gastrodia elata | 0.450 | |
| SRR5643659 | five period of Gastrodia elata | 0.220 | |
| SRR5643660 | five period of Gastrodia elata | 0.060 | |
| SRR5643661 | five period of Gastrodia elata | 0.140 | |
| SRR5643662 | five period of Gastrodia elata | 0.180 | |
| SRR5643663 | five period of Gastrodia elata | 0.170 | |
| SRR5643664 | five period of Gastrodia elata | 0.160 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.650 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.390 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.760 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.040 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.800 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.360 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.730 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.320 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 4.010 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1.290 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1.220 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1.220 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.32 |
| Juven | Juvenile tuber | 0.47 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.59 | |
| Mother_Juven | Mother tuber of Juvenile | 0.79 |