Detail information of GWHGAAEX007344/evm.TU.scaffold_2.157


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743868760|ref|XP_010905656.1|1.88E-23PREDICTED: 30S ribosomal protein S31, mitochondrial [Elaeis guineensis]
Swissprottr|P47909|RT31_ORYSJ8.00E-2230S ribosomal protein S31, mitochondrial (Precursor)
trEMBLtr|I1IS36|I1IS36_BRADI1.00E-20Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI4G35920.1}
TAIRAT2G212902.00E-08Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001069898256999882+
Transcript Sequence

Network for GWHGAAEX007344

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF17067.4RPS3126771.50E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.210
SRR2545915Juvenile tuber16.370
SRP108465SRR5643513five period of Gastrodia elata10.800
SRR5643514five period of Gastrodia elata8.160
SRR5643515five period of Gastrodia elata9.220
SRR5643524five period of Gastrodia elata12.150
SRR5643525five period of Gastrodia elata7.960
SRR5643528five period of Gastrodia elata11.510
SRR5643658five period of Gastrodia elata8.950
SRR5643659five period of Gastrodia elata15.910
SRR5643660five period of Gastrodia elata14.030
SRR5643661five period of Gastrodia elata13.240
SRR5643662five period of Gastrodia elata13.230
SRR5643663five period of Gastrodia elata14.920
SRR5643664five period of Gastrodia elata15.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.000
SRR6049655Rhizomagastrodiae_C368-T10_good_19.450
SRR6049656Rhizomagastrodiae_C368-T07_good_112.350
SRR6049657Rhizomagastrodiae_C368-T07_good_110.000
SRR6049658Rhizomagastrodiae_C368-T04_good_112.540
SRR6049659Rhizomagastrodiae_C368-T04_good_19.960
SRR6049660Rhizomagastrodiae_C368-T01_good_114.020
SRR6049661Rhizomagastrodiae_C368-T04_good_110.010
SRR6049662Rhizomagastrodiae_C368-T01_good_18.190
SRR6049663Rhizomagastrodiae_C368-T01_good_111.300
SRR6049664Rhizomagastrodiae_C368-T10_good_112.330
SRR6049665Rhizomagastrodiae_C368-T10_good_112.330
SRP279888GastroGastrodia elata tuber 7.44
JuvenJuvenile tuber4.41
Mother_GastroMother tuber of Gastrodia elata 5.61
Mother_JuvenMother tuber of Juvenile 3.72