Gene detail

Detail information of GWHGAAEX007346/CADD00597.4.gene

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|147766788\|emb\|CAN74160.1\|	1.03E-19	hypothetical protein VITISV_018405 [Vitis vinifera]
Swissprot	tr\|P10978\|POLX_TOBAC	2.00E-09	Endonuclease
trEMBL	tr\|A5B4R8\|A5B4R8_VITVI	4.00E-20	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN74160.1}

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000010	7019448	7024866	-

Transcript Sequence
>GWHTAAEX007346 GAAGGTTTAGAAAATCATACAACTGTAATAATAATTTTTAATGAACGGGTTCTGATCCGCAAATGACTTGAGGATCATTGATTTTACGGTATTAAACTCCATTGTTGGTTATGAAGAACTCTTCGCAACGGCTTTAAAACCGTTGATATTCTCAATTCCATGGGCGTCTCTGGCAACAAACTATGTATCTTTTGTATCTCTTTGCCATTATTTATTTTCTCTTGCTGCAACAAGTCTTGGAACTTGTTGATGGTATTTGGATTCAATTGCAACTTTAGTTGGAGCCAAATGATCATACATTTAAGGCTAAATCTCTTTCGGTAAAATACAAGGGATAGATTTTGGAAGTTGTTTTCTTTTCTTTTGTTGTTCGGCTGCAGTTCAACCTGGCCTTTATTGCAGCAATTAGAGATTATAGTTGCATGGCTTCAGGATGGATTGGGTATTTTATAGATTGTTTGATGAAAGATCTTTTTGCTTAGTCTCACAGCTCTATCTTCTTATGATTATACGCCTCTGCTCCTCTTACAGCCTGGAGAAGATTTATTCTCCTGGTTGCTGGAACTGGATTCATTAAAACGTGGACGGATTATGATGAATATCAACCTCTACCTGCCTTGCGGGACTCGAACGCCTCTGGATTGCAACAAATACTACCTTCATAATCGCAACTCTGCCTTCATAATTTTCAAGAAAAAGAGAAGCTGGACAGAGCAGAAAAAGGCCAGCCACACAAAATCAACAACCAAATAGACATCTCTGCATAAAACTTAAAACAGACCAAGTAGAACACTAGATGCAGCCACCCAAAAATAAAGTACCAATCTAGTATTACACAAACAATGGGTGCACCAATTCAATTTATTTGTGAAAGTAGTCCGAAGCCCATTGAATCATTTATCATAACAAGCTACCCTCTTGTTTTCCCGAATGATACCGGAAAGGCTGTCAGGGAGTAGTAGTAAGTATCCTCCCAAGCCAAAAGAGATTGCCACTACAGCAAAATGCACAAAAATTTGCAACGTGGTTACAGTCATGCAGCACATGTGCAAACAAAATATTACCTAATAAAAACTAAAAAGAGAAAGTATCAAAGTGAAGGTCTGCTCCTTTCTTTCTCCTTGAAGTCTCCAAAGCACGCTTTGACTTCCTTGATGGAAGCATTGTTGCCACCCTCTATGACGATCCCATCAAATCTCTAGCAAGATGCTGCAATAGGGATCACTGTGTCACAAGGGGAGAAATCCCAAACCCGAGCACCGCAGTAGATACCAAGGCATCGCCCTCGCCGCAAAAAGCAACTTTGTTGTGAGCCTCACCATCACCATTAAGAATGAACCGTGAAGATTGGGCTTGAGCAACTTAGGAAATGTGGAAAAGGGGTCTTTAGAGGCAGTAGTTCCCTAGAAACCGAGCTCAGTGAAAAGTCCAATCTCAATGGCCTCTGCAAGAATAAAATTAGCAAAAACAATTGGAGTGGGAAATGATGGGCCATGCTTCTTTTCGCAAGTTTACGGCTCCAAGCTTGTTAAATAATGCATCCATATCCATGTGCCTAGAGGCAACGCAAGATAAAGGAATTTGAGCACTCCCTACTATCCAATCTCAGCACAGGGATGCCCCAATCTGAAAGAGCTTAATTCCCAAAGTGTAAGAGCATTTAATGGTGAGGTGATCCTGGCTTTTCTTCTTGTCATAACTTTAAGCAAAACTAAGAGAACTAGCAAGCTTGTGAATACACAACCAGTGATTGGTAGGGATGGCGTTGTGGATAAGTCTCCATACAAAACGACATTATCTCGGTTAAGCTTCCACATGTGTGGATGGAAATTGATACCAACTCCATGCAAAAAATAACAAGATATGGGAGAGGGGGAGCACCCCTATTTGAACCCTCTTTGGGTTTCGATCCAAGGAATCATTCTCCTGTTGACCAATAGCCGAAACTTAAGCCATGTAATGCATTGGACCACCCATATGTTCTATGTATCCAGAAATTCAATCTGTTGAGTCCAACCCACCCAAGTTCTGAAGACACAGACACAGGCTCGTGTTATTCTAAGGCATGAGATCTAAATTCGCTCAGGCATGTTGTATACATGAAGTGCCAAGGCACAAGGGGAGCCGAAACGCAATTCAGAAGTGTAATGACTTACTCGCCCAGATGTGTTATTAGATCGTGCTCATTTGAGTAACGGCTTGCGTTTCAGCAAATCTTCGTTACAATTAAATGAATGTAATGATTTGATTGAAGAATTGTCGATTCATTAATTGGAGTAGTTAAGATAAACAGATGGTTCATGTTGTAACCGCCTAAGCTATTAAACACTCATGCACAATATGACGCGCTTGGGCGAGTAGAGGCAATGAGGTGGACTTTTCCTGGCTGTTGTCCAATTGAGAAACCCATATCATTTCCATTTTAAGCACTCATGTTTCGAGAAATCTTTGGATGAGAAGGAGCCTATGCTTCCAACAAATCAAGTCTTTCGAGATTCTTCGAGAAAAATTGTTTGTGGTCATTTTGCTAGGAGATTCATATTCATGACATAATTTTTCCCTTTTTTTCTCTAAAATTGTAAAATACATTTAGTATTTTGAGATCATTTGTAGAGAAATTTTTGTAAATTAGTGTTTCTCTGTCAACAATTTTTTATATTTTTTATCCCCTCTTTTATCCTCTACAAAAGGTATTAGAGCAAATTTCATGGGTTGAATTTTCGTTGAGTGTGAGAGTGTATTTTTTGAGAAAGAGCTATGGAAAGTAATCTAAGTTGTACAATTACTTTGAATAGCTCAAAGAAGTGAGACAAAAAAACAGAGGATGCCAAGACTCATAAAGTGTTGCAAGTGCCACTGAGGACTTCCACATGCTACATGAGGAGAGCACCATCAATCTAGTTAGTCTGGCGACTAATTAGGTAATTGACAACGGAGTTTCAATTCATGCAACATTAAAGAAAGAGTCATTCTCATCTTATGCCCAGAAAAAATTTGGGCATGCTAGGATAAGGGCTAATGTAGAGCTGCTTCAAGTCAAGTTCAAGCGTTCAGCTCAGGCTCGAGCTCGAAGATTTCGAGTGGAGTTCGAGTCGAGTTAATTTTGAGTCAAAAAAGTTCGAGTTCAAGCCGACTCGAACTTGATTCAAACCAGATTCGAAATGTATAAATACAAAACCTTCCACTATTTTTAAAAGGCAACTCACGGCTGGCTTTGTGCTATGGAGGGTACCTTGGATTGATTCGTAGCCAAATATGTGCTTTATTTTTTTAAAACAATATTTTCTCAAAAAATAGCGCTCATACTAGGTATTAAACCCGAGATCTTATGGAGAATAAAGAGAACCTTGACCACTTGTGCTGCAAAAAAATTCTATCAATGTGTCGCACAATATGTCTGTATTTGTATTTATTTAATATATTTCAAATAACTCGAACCCATTTTGAGTCGGGTCGAGCCCACCTCGAACTAGACTAGAACTATGTTCGAGTCCAACCACTCAACTACTTCTACTCAAAATTCAAAGTAGTTTCGAGCAAATTTTGAGTTTTGGGTAAAATTGTCAGCCCTAGGTCAATGACATAACCAAGGCCATCGAATTCAAAACCACTCGCTTGAAGATGGATAATGAGAAATATTTTAAATTTTAAGTAAATCAAAAATATTCCAGATATTCTCCTCAACTTGATTTCTACATGAAAGTTAGATGACAAAAACAACTAAAATACCTTCAGTGATGAGCAATGGTAGCTAACAAGAGGATTGTTGGTGGTCTCTCACAGAAAAAGAGGTCTTGTTGTATATGTTGCAAGCAAAGGAGATGGAACCCTCAATAAATGCGGCATATGAAGATGATGAAGAGCTGCAGCTGTGGCATTCTTGACTAGGCTACATGAGTGAGAGGGGGTTGTATGTGCTAACAAAGAACGAAGATTTATACAAAATTGGAGTATTGAAAGAATGCGAGCATTGCTTTGCCAGAAAACAGACTTGAGTTACCTTCAAAAGTGTCGAGCACTCCAAAAAGACGGAGAAACTTGGGTTGGTTTATTATGATATTAAAGAACCTATTACTAATTATTTTATAATGTTTATGATGATTATAATAGAACAAATTGGGTTTATATATTCCGTATTATAGATAAATTTGTGAGGCCTTTAAAGAGTTTCATGTATAAGTTGAGAGAGGGTGAAGTCAAGCTAAATTGCATTAGAGCCGTCAACATGGGAGAACTTAATGAAGAGTTTGATGACTACTACAAGAAAAATGGCATGTCATCAAGAGAACTCCATCCAAGCCTTTGAAGTTGAACGAGTTGGTGGATCACATAAACTACACCTTAGTGGAGAGGGGGAAGCTCTAAGTACTGCAGTCCGCATACAATCTTTCTCTATCAGTTCCACTTGACTTCGATGTCTCTAATTAATCCTAGTCAAAGAAGGAAGTTTATTACAATCTTCTTAGGGTATTCGAGTGCAAAGCCTACATACACACACCTAAAGATGAGAGGTCAGAGCATGACGCAACAACAAGACAATGTGTCTTTATTGGTTATAACTCAAACTGCGCTGGATACAATTTTACGATTCAGTGTTGAAGGGAGTTATAAGGAGCATGGATATTATCTTCAAGGAGGATCAGAACATATTGACAATATGGAAATATTTGAGATGATGGTTCAGTATAAAAAAAAATTGGCAAAGACATAATACTTGCTCAAATGGGGATCTCCAATCAAGGGGGAGAAGTCAAAGAAAAATAAGAGGTAGCAACCATATAAAATCAAGCTAAGAAGCCCATACTCAGAAGATCTACAAGAGAAAAAAGACCTTTCACCAAATGCTCAACAAAATATATGATGATCACAAATACTAATGAGCTTGAGTATTTTTGGAAGCCATAGCAATGTAAAAGGAGCAAGAGTAGGTGAAGGAAATGAAAGAGGAGATGAAGTCACTTGAGGAAAACCACACCTACAATTTGATGAATCTTTCACCTAGGTAGTGAGCCCTGAAGTACTATTGGAACTACAGGGTGAAGAATGAGATGAAAATAAACTATGATACAAAGGTCGTTTAGTGGTAAAGGGTTTTATATAGAAAATGGGAACTGATATTGAGAAAATCTTTTCCACGGTTGTGAAGATGTCTTTAATTCGGATGGCACTTGGAGTAGCAGCTTTATATGGCTTGAAAGTAGAATATCTCAAC

Network for GWHGAAEX007346

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX007346
EGLENHTTVIIIFNERVLIRKLEDHFYGIKLHCWLRTLRNGFKTVDILNSMGVSGNKLCIFCISLPLFIFSCCNKSWNLLMVFGFNCNFSWSQMIIHLRLNLFRNTRDRFWKLFSFLLLFGCSSTWPLLQQLEIIVAWLQDGLGILIVKIFLLSLTALSSYDYTPLLLLQPGEDLFSWLLELDSLKRGRIMMNINLYLPCGTRTPLDCNKYYLHNRNSAFIIFKKKRSWTEQKKASHTKSTTKTSLHKTNRPSRTLDAATQKSTNLVLHKQWVHQFNLFVKVVRSPLNHLSQATLLFSRMIPERLSGSSSKYPPKPKEIATTAKCTKICNVVTVMQHMCKQNITKLKRESIKVKVCSFLSPSLQSTLLPWKHCCHPLRSHQISSKMLQGSLCHKGRNPKPEHRSRYQGIALAAKSNFVVSLTITIKNEPRLGLSNLGNVEKGSLEAVVPKPSSVKSPISMASARIKLAKTIGVGNDGPCFFSQVYGSKLVKCIHIHVPRGNARRNLSTPYYPISAQGCPNLKELNSQSVRAFNGEVILAFLLVITLSKTKRTSKLVNTQPVIGRDGVVDKSPYKTTLSRLSFHMCGWKLIPTPCKKQDMGEGEHPYLNPLWVSIQGIILLLTNSRNLSHVMHWTTHMFYVSRNSICVQPTQVLKTQTQARVILRHEIIRSGMLYTSAKAQGEPKRNSEVLTRPDVLLDRAHLSNGLRFSKSSLQLNECNDLIEELSIHLELRTDGSCCNRLSYTLMHNMTRLGERQGGLFLAVVQLRNPYHFHFKHSCFEKSLDEKEPMLPTNQVFRDSSRKIVCGHFARRFIFMTFFPFFLNCKIHLVFDHLRNFCKLVFLCQQFFIFFIPSFILYKRYSKFHGLNFRVECIFERAMESNLSCTITLNSSKKDKKTEDAKTHKVLQVPLRTSTCYMRRAPSILVWRLIRLTTEFQFMQHRKSHSHLMPRKNLGMLGGLMSCFKSSSSVQLRLELEDFEWSSSRVNFESKKFEFKPTRTFKPDSKCINTKPSTIFKRQLTAGFVLWRVPWIDSPNMCFIFLKQYFLKKRSYVLNPRSYGEREPPLVLQKNSINVSHNMSVFVFIYISNNSNPFVGSSPPRTRLELCSSPTTQLLLLKIQSSFEQILSFGNCQPVNDITKAIEFKTTRLKMDNEKYFKFVNQKYSRYSPQLDFYMKVRQKQLKYLQAMVANKRIVGGLSQKKRSCCICCKQRRWNPQMRHMKMMKSCSCGILDATVRGGCMCQRTKIYTKLEYKNASIALPENRLELPSKVSSTPKRRRNLGWFIMILKNLLLIILCLLNKLGLYIPYYRICEAFKEFHVVERGSQAKLHSRQHGRTRVLLQEKWHVIKRTPSKPLKLNELVDHINYTLVERGKLVLQSAYNLSLSVPLDFDVSNSSKKEVYYNLLRVFECKAYIHTPKDERSEHDATTRQCVFIGYNSNCAGYNFTIQCRELGAWILSSRRIRTYQYGNIDDGSVKKIGKDIILAQMGISNQGGEVKEKEVATINQAKKPILRRSTREKRPFTKCSTKYMMITNTNELEYFWKPQCKRSKSRRKKRRSHLRKTTPTIIFHLGSEPSTIGTTGRMRKTMIQRSFSGKGFYIENGNYENLFHGCEDVFNSDGTWSSSFIWLESRISQ

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.720
SRP064423	SRR2545915	Juvenile tuber	7.320
SRP108465	SRR5643513	five period of Gastrodia elata	10.300
	SRR5643514	five period of Gastrodia elata	11.750
	SRR5643515	five period of Gastrodia elata	7.680
	SRR5643524	five period of Gastrodia elata	16.340
	SRR5643525	five period of Gastrodia elata	9.230
	SRR5643528	five period of Gastrodia elata	4.300
	SRR5643658	five period of Gastrodia elata	5.560
	SRR5643659	five period of Gastrodia elata	3.780
	SRR5643660	five period of Gastrodia elata	6.000
	SRR5643661	five period of Gastrodia elata	4.230
	SRR5643662	five period of Gastrodia elata	4.070
	SRR5643663	five period of Gastrodia elata	5.230
	SRR5643664	five period of Gastrodia elata	4.450
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	12.430
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	16.340
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.060
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	11.870
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.960
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.360
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.650
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.460
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.410
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.930
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.930
SRP279888	Gastro	Gastrodia elata tuber	12.65
	Juven	Juvenile tuber	15.94
	Mother_Gastro	Mother tuber of Gastrodia elata	46.99
	Mother_Juven	Mother tuber of Juvenile	35.37