Detail information of GWHGAAEX007349/evm.TU.scaffold_2.163


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG47099.00E-17Uncharacterized conserved protein
nrgi|743785465|ref|XP_010921912.1|1.28E-48PREDICTED: ribosomal RNA-processing protein 17 [Elaeis guineensis]
trEMBLtr|K4AET5|K4AET5_SETIT2.00E-38Uncharacterized protein {ECO:0000313|EnsemblPlants:Si037392m}
TAIRAT1G112409.00E-17Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001073808327386287-
Transcript Sequence

Network for GWHGAAEX007349

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09805.8Nop25231202.50E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms31.240
SRR2545915Juvenile tuber24.220
SRP108465SRR5643513five period of Gastrodia elata32.570
SRR5643514five period of Gastrodia elata37.270
SRR5643515five period of Gastrodia elata30.810
SRR5643524five period of Gastrodia elata40.400
SRR5643525five period of Gastrodia elata37.910
SRR5643528five period of Gastrodia elata41.890
SRR5643658five period of Gastrodia elata37.100
SRR5643659five period of Gastrodia elata34.240
SRR5643660five period of Gastrodia elata40.620
SRR5643661five period of Gastrodia elata34.810
SRR5643662five period of Gastrodia elata40.120
SRR5643663five period of Gastrodia elata37.650
SRR5643664five period of Gastrodia elata35.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.680
SRR6049655Rhizomagastrodiae_C368-T10_good_150.500
SRR6049656Rhizomagastrodiae_C368-T07_good_126.770
SRR6049657Rhizomagastrodiae_C368-T07_good_128.010
SRR6049658Rhizomagastrodiae_C368-T04_good_129.790
SRR6049659Rhizomagastrodiae_C368-T04_good_133.830
SRR6049660Rhizomagastrodiae_C368-T01_good_132.610
SRR6049661Rhizomagastrodiae_C368-T04_good_129.930
SRR6049662Rhizomagastrodiae_C368-T01_good_130.380
SRR6049663Rhizomagastrodiae_C368-T01_good_125.800
SRR6049664Rhizomagastrodiae_C368-T10_good_131.070
SRR6049665Rhizomagastrodiae_C368-T10_good_131.070
SRP279888GastroGastrodia elata tuber 35.30
JuvenJuvenile tuber34.13
Mother_GastroMother tuber of Gastrodia elata 45.43
Mother_JuvenMother tuber of Juvenile 43.89