Detail information of GWHGAAEX007352/evm.TU.scaffold_2.166


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695047708|ref|XP_009411742.1|9.07E-167PREDICTED: scarecrow-like protein 3 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LPR8|SCL3_ARATH8.00E-86Scarecrow-like protein 3
trEMBLtr|M0TP22|M0TP22_MUSAM2.00E-170Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P09690_001}
TAIRAT1G504203.00E-85scarecrow-like 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001075045627505782+
Transcript Sequence

Network for GWHGAAEX007352

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.13GRAS384003.00E-130
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.800
SRR2545915Juvenile tuber11.010
SRP108465SRR5643513five period of Gastrodia elata38.070
SRR5643514five period of Gastrodia elata28.850
SRR5643515five period of Gastrodia elata17.910
SRR5643524five period of Gastrodia elata29.240
SRR5643525five period of Gastrodia elata25.280
SRR5643528five period of Gastrodia elata27.410
SRR5643658five period of Gastrodia elata18.880
SRR5643659five period of Gastrodia elata3.380
SRR5643660five period of Gastrodia elata1.620
SRR5643661five period of Gastrodia elata3.690
SRR5643662five period of Gastrodia elata4.000
SRR5643663five period of Gastrodia elata2.390
SRR5643664five period of Gastrodia elata7.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.480
SRR6049655Rhizomagastrodiae_C368-T10_good_135.740
SRR6049656Rhizomagastrodiae_C368-T07_good_140.140
SRR6049657Rhizomagastrodiae_C368-T07_good_117.330
SRR6049658Rhizomagastrodiae_C368-T04_good_125.940
SRR6049659Rhizomagastrodiae_C368-T04_good_119.290
SRR6049660Rhizomagastrodiae_C368-T01_good_130.540
SRR6049661Rhizomagastrodiae_C368-T04_good_117.410
SRR6049662Rhizomagastrodiae_C368-T01_good_140.390
SRR6049663Rhizomagastrodiae_C368-T01_good_131.180
SRR6049664Rhizomagastrodiae_C368-T10_good_146.370
SRR6049665Rhizomagastrodiae_C368-T10_good_146.370
SRP279888GastroGastrodia elata tuber 3.50
JuvenJuvenile tuber113.33
Mother_GastroMother tuber of Gastrodia elata 69.49
Mother_JuvenMother tuber of Juvenile 111.48