Gene detail

Detail information of GWHGAAEX007355/evm.TU.scaffold_2.169

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|167629303\|ref\|YP_001679802.1\|	3.00E-47	hexokinase [Heliobacterium modesticaldum Ice1]
KOG	KOG1369	0	Hexokinase
nr	gi\|672189526\|ref\|XP_008775017.1\|	0	PREDICTED: hexokinase-3-like isoform X2 [Phoenix dactylifera]
Swissprot	tr\|Q2KNB4\|HXK3_ORYSJ	0	Hexokinase-3
trEMBL	tr\|M0TUQ4\|M0TUQ4_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P29510_001}
TAIR	AT1G50460	0	hexokinase-like 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000010	7588194	7645338	-

Transcript Sequence
>GWHTAAEX007355 ATGGGAAGAGTGGGATTCAGTGTTGCGGTGGGGTGTGCGGTTGTTTCTTGCGCGATTGCGGCAATATTAGTGGGTCGGAGAGCGAGGAGCAGGCGTCGGTGGGGAAGAGCGTTGGAGGTGGTGCGGGAGTTTGAGGAAGGGTGCTTCACTTCTATTGGGAGGCTAAGGCAGGTGGTCGATGCCATGGCGGTGGAGATGAACGCCGGGCTCGCATCGGAAGGGGGTAGCAAGCTCAAGATGCTGCTCACCTTCATAGATAGCCTGCCGGATGGGAAAGAGATGGGCACTTACCATTCTCTTGATTTTGGAGCTTCAGGTATTAGAGTATTGCGTGTGGAACTTGGGGGAAGTGACTCTATGATTTTGAGGCACCAAGTTGAAGTCTATTCAATTCCTCCATATTTAATGATGGGCACAGTAGAGGAGCTATTTGATTTTATTGCTATGACACTGCAAAAATTTGTAGACACAGTTGAAGGGTTTGAGCAGACACCTGATTTAAGAAGGGAGCTTGCTTTTACCCTGCCTTTTCCTATTAAACATGTTTCAGCTTCTTCAGGCTTCCTCATCAGATGGACAAAGGGATTTGCAATTGAAGATGCTATTGGAAAAGATGTTAAGCAATGTTTAGAAGAAGCAATGTATAGGAGGGGACTAAACATACGGATCACAGCACTGGTTAATGATATAGTGGGTACATTAGCTCTCTGTCATTATTATGATAAGGACACAGTTGCTGCAGTTGTTATTGGAACAGGAACTAATGCTTGCTATGTGGAATGCACCGAAGCAATTATCAAGTCTCAAGGCCTCCTTACAAATTCTGGAGGCATGGTTGTTAACATGGAATGGGGTAGTTTTTGGTCTTCTCATCTGCCGAGGACTTCTTATGATATTGCTCTAGATGAGGAGAGCTTGAATCAAAGTGATCAGGGCTTTGAAAAAATGATTTCGGGAATGTATCTGGGAGACATTGCTAGAAGGGTGCTCTATAGGATAGCGCTAGTATCTGATATATTTGAAAATGATGCTCGTTATTTGGCTGTACCCTTCATGCTAAGGACTCCACTCATGGCAGCCATGCACGAAGACAATTCTCCAGACTTGAGAGAGGTTGCAAAAATTCTACGAGAAAACCTCGCGATGCAAGATGTTCCTTTGAGGGCTCGACGGATAATAGTAAGGGTGTGTGATATCGTAACAAGGAGAGCCGCGCGGCTCGCTGCGGCTGGTATTGTTGGCATACTAAAGAAAATAGGCAGAGATGGCAGCGATGCGGCTGGGACGGGCAGGCTTAAACGAACGGTTATCGCAATGGCTGGAGGTCTTTATGTCAGTTATGCACTTTTCAGAGAATACTTGAATGAGGCTGTGGAGGAAATTCTGGGGGAGGAATCTGCCCATAATGTTGTTCTAAAGACATGTGAAGATGACTCGGGTATAGGTGCTGCTCTGATTGCTGCCTCACTCTCTTCCTCAAATCCATAA

Network for GWHGAAEX007355

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00349.20	Hexokinase_1	41	239	1.80E-52
PF03727.15	Hexokinase_2	246	488	2.70E-75

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00844	HK	Metabolic pathways	map01100
		Microbial metabolism in diverse environments	map01120
		Biosynthesis of antibiotics	map01130
		Carbon metabolism	map01200
		Glycolysis / Gluconeogenesis	map00010
		Fructose and mannose metabolism	map00051
		Galactose metabolism	map00052
		Starch and sucrose metabolism	map00500
		Amino sugar and nucleotide sugar metabolism	map00520
		Streptomycin biosynthesis	map00521
		HIF-1 signaling pathway	map04066
		Insulin signaling pathway	map04910
		Carbohydrate digestion and absorption	map04973

Gene Ontology

GO term	Ontology	Name
GO:0001678	Biological Process	cellular glucose homeostasis
GO:0005975	Biological Process	carbohydrate metabolic process
GO:0004396	Molecular Function	hexokinase activity
GO:0005524	Molecular Function	ATP binding
GO:0016773	Molecular Function	phosphotransferase activity, alcohol group as acceptor
GO:0005536	Molecular Function	glucose binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	82.620
SRP064423	SRR2545915	Juvenile tuber	63.550
SRP108465	SRR5643513	five period of Gastrodia elata	53.000
	SRR5643514	five period of Gastrodia elata	70.640
	SRR5643515	five period of Gastrodia elata	78.290
	SRR5643524	five period of Gastrodia elata	67.510
	SRR5643525	five period of Gastrodia elata	27.420
	SRR5643528	five period of Gastrodia elata	33.840
	SRR5643658	five period of Gastrodia elata	31.740
	SRR5643659	five period of Gastrodia elata	61.760
	SRR5643660	five period of Gastrodia elata	68.380
	SRR5643661	five period of Gastrodia elata	62.210
	SRR5643662	five period of Gastrodia elata	59.880
	SRR5643663	five period of Gastrodia elata	66.600
	SRR5643664	five period of Gastrodia elata	46.840
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	65.050
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	25.580
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	55.550
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	75.920
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	65.750
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	76.240
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	70.800
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	55.010
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	42.900
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	61.130
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	35.360
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	35.360
SRP279888	Gastro	Gastrodia elata tuber	46.99
	Juven	Juvenile tuber	39.22
	Mother_Gastro	Mother tuber of Gastrodia elata	70.91
	Mother_Juven	Mother tuber of Juvenile	50.47