Detail information of GWHGAAEX007364/evm.TU.scaffold_2.187


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695050047|ref|XP_009412987.1|7.45E-53PREDICTED: WRKY transcription factor 55-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SHB5|WRK55_ARATH5.00E-38WRKY transcription factor 55
trEMBLtr|M0TLS5|M0TLS5_MUSAM3.00E-53Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P01730_001}
TAIRAT2G40740_21.00E-35Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001085725518577700+
Transcript Sequence

Network for GWHGAAEX007364

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY1291881.70E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.280
SRR2545915Juvenile tuber8.500
SRP108465SRR5643513five period of Gastrodia elata5.760
SRR5643514five period of Gastrodia elata5.400
SRR5643515five period of Gastrodia elata10.410
SRR5643524five period of Gastrodia elata8.110
SRR5643525five period of Gastrodia elata20.860
SRR5643528five period of Gastrodia elata67.120
SRR5643658five period of Gastrodia elata22.720
SRR5643659five period of Gastrodia elata25.860
SRR5643660five period of Gastrodia elata12.320
SRR5643661five period of Gastrodia elata28.930
SRR5643662five period of Gastrodia elata43.970
SRR5643663five period of Gastrodia elata16.430
SRR5643664five period of Gastrodia elata36.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.240
SRR6049655Rhizomagastrodiae_C368-T10_good_12.430
SRR6049656Rhizomagastrodiae_C368-T07_good_13.340
SRR6049657Rhizomagastrodiae_C368-T07_good_14.330
SRR6049658Rhizomagastrodiae_C368-T04_good_18.030
SRR6049659Rhizomagastrodiae_C368-T04_good_18.440
SRR6049660Rhizomagastrodiae_C368-T01_good_114.380
SRR6049661Rhizomagastrodiae_C368-T04_good_17.070
SRR6049662Rhizomagastrodiae_C368-T01_good_16.320
SRR6049663Rhizomagastrodiae_C368-T01_good_18.990
SRR6049664Rhizomagastrodiae_C368-T10_good_15.940
SRR6049665Rhizomagastrodiae_C368-T10_good_15.940
SRP279888GastroGastrodia elata tuber 9.73
JuvenJuvenile tuber3.63
Mother_GastroMother tuber of Gastrodia elata 129.74
Mother_JuvenMother tuber of Juvenile 108.53