Gene detail

Detail information of GWHGAAEX007368/evm.TU.scaffold_2.192

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672179698\|ref\|XP_008810020.1\|	5.20E-141	PREDICTED: uncharacterized protein LOC103721535 [Phoenix dactylifera]
trEMBL	tr\|M0TSE2\|M0TSE2_MUSAM	4.00E-120	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P21390_001}
TAIR	AT5G05240	3.00E-51	Uncharacterised conserved protein (UCP030365)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000010	8617772	8638563	-

Transcript Sequence
>GWHTAAEX007368 TATGCCGTGAGGCCTCCTATTTCCCACGCTCTCTTCCTCCATTTGAATTTGAAAAATGAAAGCTTACTGTCTGGGAATGAAAAAGAGCGGGTCGAGCGAGTGCCGCAGAGAAATTGAGGAGGAAAGAGAGATAGAGATCGAGAGAGCGAGACCTGCCTTCCCGCATTTAAATCGGAGCCCTAATTGAAATGAAAGCAACAGCCTTTTTTCAAAGCCCCTAACCCTCCTACCAAGATCTCTTTTTTCAAAGCCCTCACCCGCTTTCTGGTCGAATAGGATTATGGATGGGTGGGAGGCAACGCTGGAATTCGATCCATCTGCCGCATGCAGCCCTAGATCGTCTGAAAGATCTCCATTTCAGGAAAGGAGAACGAGGAACAGGGATGCAGATCTGGAAAAGCCAAACAAGCGGGTTAAGAGAGTAAAGCTGCGCGACCTGGAAACGGTGATGCGTTCGGAGGAAGGAAACAGCTCATCTTTTCAATTCCCAATAGAATATGAAAGTGACACATTTGAAAATTCCAGTGAGGAAGTGGAGAACTCCCAAATCACCAAGGCAACTGATTTTAGGCTTTTTAACAGCCAATTGGACAGGCCAATAATCAATTGTTCTCTTGAAACTGATGCCGCTGTCCTCAGACTGGGTCGGGCCATCAACTTACAGTCTTTCATGGTCACGACCAAGGCAGATAACTCGAAAGAGATCTGTAGTGAAATAAAAAATGATCCTCAAGCAGCTGATAGGCTGAGGCTTGAGGCGGATCTCAGCAATCCCTTTTACCCATACAAAAAGCTAGGACAGGTGAGAGCTACTGATACTTCTGAATGTGGTAGCACCACTGGTCCCTTGGAAAACAATGATTCAATGAGAAGATGGAATGAGATGAAGCAGAATGGTTTTGTCTCTTCTTTTAAAGGAATTGCTCCCATTTCAAAGCCCATGGGTCGTCAGCCTAAAAGGAAAAAAAACGAAGAGACCAAGAGAAAGATCGACTTGTCACAGGGAGAACTGGCATATAAATTCACCAAGGTTACTGCCCCGAGTGGATTGCTTTCTGGGCTTAACCCTGGTATCATCAAGCATGTAAGGAATAGTAAGCAGGTGAACTCAATTATTGAAGCAATGCTTCAAAGCGAGAAGCTTGAGCTTGAGAAGGAAGAGCTACCTCATAAACCCCTTGAACAATCTAAGAGTGGAAATAGGGGGGTCAATGTGGGGGAAAGCGAACACAGGCATGCATCAGTGGCTGATCAACTTGATCTATCACTAAATAAGGCATTTAATCCTGCTTGTTTTGGGTCTAGAGCACAAAGCAATGAACTGGATATGTCTGACAATAGATTCAACAATGATAGCAGCAATGCATCATTTTATAACTCAGAATTTGATGATGATGCTCTTACACTAAAACTCTCTTCTGGTGTTATATCAACACAACAGGTTAACAGTGCAGCTATGGCTGATTTTTCAATAAATAAAGAGAACTCAACTTCTCTCTCGTTTAAAGCTGCTAGTGTTGCTTCTCAATGGTTAGGGTTGATCCAGCAAGATATTAAAGGTCGGTTGGCTGCACTACGGCGCAGCAAAAAGAGGGTAAAAAATGCAATTCAGACAGAGTTGCCGTTCTTGCTATCCAGTGATGTTGAACCTCACCAAAAGAATGAGTCCAGATTGTTACATTCCTCTTTGTTTGATCGTCCCAGAAAGGAAACTTTAGACATGCATATGGCTCGATGGAAAAATCTTTTTGGTCAGATGGAGAAATCACTTTTGGAGGAGGGAAAGCATCTTGAAAAGTGGCTTAGGCAAGTTGAAGAACTTCAATCCCAATGTGATAAAGGTCTAAAGTATGTTAGTACAAATGGCCTGCCAAATTTGGATTCGTCCGAGGATTCAAGTGCACAGAAGAACAAAGAGTCTTGGGAACGGGAATGTGCAGTCAGGGCAGCTGCAGCTTCCATCTACTCCACTAGCAACTTGATAATGAATGCAAGATAATGATGCTCCTTATTCTGATATCATCATCCTTTTTTTCTTTATTTTCTTTAACTGAGGATCTTCCTTTAGTTGGTCCTCTTGTTCAGTTTATTATTGCATTTTTGTTTGGAAGCTGTTTCATATCCATCTGTATCATTTTATTTTAGGCCCCTTTTCCTAACAAAATTGATCAGAGAGTTGTATCCATATTGTCTCTTCTTGTCTGTCTGTATCCCATAATTTATTCTAAATTCGTCATCAAGATTTCCTCTGTAATCTCACTTCTATGAACATTGTAATGTTTGTTCAACTGATTGAATAATATATATTGTTTTTGACGATCTTGTGCGC

Network for GWHGAAEX007368

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.060
SRP064423	SRR2545915	Juvenile tuber	4.600
SRP108465	SRR5643513	five period of Gastrodia elata	5.480
	SRR5643514	five period of Gastrodia elata	5.800
	SRR5643515	five period of Gastrodia elata	6.660
	SRR5643524	five period of Gastrodia elata	5.390
	SRR5643525	five period of Gastrodia elata	4.440
	SRR5643528	five period of Gastrodia elata	4.890
	SRR5643658	five period of Gastrodia elata	6.630
	SRR5643659	five period of Gastrodia elata	6.240
	SRR5643660	five period of Gastrodia elata	5.360
	SRR5643661	five period of Gastrodia elata	6.070
	SRR5643662	five period of Gastrodia elata	4.900
	SRR5643663	five period of Gastrodia elata	6.850
	SRR5643664	five period of Gastrodia elata	5.960
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.850
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.080
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.660
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.540
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.410
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.590
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.950
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	8.280
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.210
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.380
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.960
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.960
SRP279888	Gastro	Gastrodia elata tuber	7.20
	Juven	Juvenile tuber	10.18
	Mother_Gastro	Mother tuber of Gastrodia elata	9.77
	Mother_Juven	Mother tuber of Juvenile	12.64