Gene detail

Detail information of GWHGAAEX007383/evm.TU.scaffold_2.210

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG4302	6.00E-172	Microtubule-associated protein essential for anaphase spindle elongation
nr	gi\|743883011\|ref\|XP_010909304.1\|	0	PREDICTED: 65-kDa microtubule-associated protein 5-like [Elaeis guineensis]
Swissprot	tr\|Q8LEG3\|MA652_ARATH	3.00E-174	65-kDa microtubule-associated protein 2
trEMBL	tr\|I1HJG8\|I1HJG8_BRADI	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI2G25500.1}
TAIR	AT5G55230	6.00E-172	microtubule-associated proteins 65-1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000010	9309874	9320063	-

Transcript Sequence
>GWHTAAEX007383 GCCCTCGTTCAAAATCCTTCTTTTAGTGGTAAAAATATGAATAATTAGTAAAAAACAGAAACGCAAGGCAAGCCAAGAACTGACGGCGATGGCGCTTGGTGCTGCATTGCTGCCCGGAATGGACGGTCGATAGAAAGCCTGCAGAGATCCATCTGAGGCGCTGAAGACGGATGAGACATCTCAAGATTTATTCTTTGATTTTGGCGCTTTAAAAATTCAAAAAAGATTCAGATCCTATGCTCTTTCAAAATTCCAGGTTTGGCAATTGGCATATCGAATTTAAGGATAAGAGAATATGATGCTTGCTTCACAATTTTCCGTTGATGCACCGATGGATGCCACTTCTTGTGGAACTTTGCTCCAGGAGTTGCAGGCTTTGTGGAATGAAATTGGTGAGTCTGACCTTGAAAGAGATAGGATGATACTTCAACTAGAGCAAGAATGTCTAAATGTATATAGAAAGAAAGTAGACCAAGAAAGAAAGCACAAAGCGGATCTAGCTCGCACATTGGCGGAGGGAGAAGCTGAAGTCTCTAAAATAATCTCTTCATTAGGAGAGATGGGGAGCCCCATTCAGGTTAGAAAGCAGAAATGTACACTCAAAGAGAAGCTGGCTAAGTTGGATCCATTGTTGGAGGATTTGAGGTGGAAGAGAGCAGAAAGGGTTAAAGAATTTTTAGAGGTTCAATTGCAGATTGTTGACATCTGTGCAGAAATATCCGAGGATTCCCTTTCAGGTGGCTCTGCATGCCCCCAAGTTGATGAACGGAATTTGACAATAAATAAGTTGGGAGAGTTGAAGTTTCAACTTCTTGAGCTGCAGGAAGAAAAGAATACAAGGTTGCAGAAGGTTAATGCTCATATTAAGGGAATACATGAACTATGCGGCGAATTGTCTGTTGATTGCAATAAGATGCTTCTTGAAGTTCATCCAAGCTATGCTGATGCTGCAAACATCCAGCCAAAGTGTATAAGCAACGAGGCAATAGCTAGACTGTCGGGAACCATCCATTCATTGAAGCAGGAGAAATCACAGAGACTGCAGAAGATTCAAGAACTTGGCAGTATACTGATAGAGTTATGGAATCTCATGGACATTGCAAAGGATGAAAAAATTAAGTATGATCATGTCACTTCGTTGATATCAGCATCTTCTGATGAGAAGTTAAGCCATGGTTGCCTTGCAATGGATGTGATTGACAAGGCCAAACTTGAAGTAGGGAGATTAAAGAACCTTAAAGCCGCCAAGATGAAAGAGCTTGCATTAAAGAAGCAGCACGAGCTTGAAGAAATATACAGAAGTGTCCACATGGATTTTGATAGTGATGCAGCACGACAGAAGATTATCAATCTCATAAATTCTGGGAAAGTAGATCTTTCGGCATTATTATCTGATATGGATAATCAGATTTCCATTGCTCGTGAGGAAGCTGCTCGGCGAAAAGACATATTGGAGAGGGTAGAAAGATGGTTATCTGTGTGCAAGGAAGAAATCTGGCTTGATGAATATGAAAGGGATCAGAATCGCTACAATGCTGGTCGGGGAGCGCATATAAACTTGAAGCGTGCGGAGAAAGCTAGGGCACTCGTGAACAAAGTACCATCTCTAGTAGAAACGCTTACAGCCAAAGTTAAAGCTTGGGAAATTGAAAAGGGAGCGTGTTTCTTATATGACAAGAAACCACTTCTAGAAACCATAGAGGACTATGCTATCAGAAGACAGCAAAGAGAAGAGGAGAGACGCCGCTCAAGGGAGCATAAGAGATTACAGGAACAGTATGCAACAGAGCAGGAGGTTTTGTTTGGCAGTAAGCCGAGCCCAATGAGGCTGCCATCTGCTAAGAAGCAGCCTCTTGGTCAGAGCAATATAAACATGCAGGGGGGCACTCCAGCTGGCCGTCGTTTCTCAATGCATTTGATGAGACCGGCTAATTTCTCAAACAGTAAGGAGAAGAAGGATGGGAACAATGCTGCTGCTGCTGCTGCTGCAATACCATTGAACTATGTTGCCCTTTCAAAGGATTCATGAGCGCCGAGAAAGAAGGCGTTTTGCATGTATTTCTCACTCTACTATCAAGAAATGAAATGACAAGAAAACAAAGCATTGAAGAAGAAACCCATTTAATGCTACAATGATACGAAGATTATATGTTTTCAGTAGAAAATTTATGAATGCGCTTGCTGTGGATCTCCC

Network for GWHGAAEX007383

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module14

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03999.11	MAP65_ASE1	47	521	1.80E-79

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.720
SRP064423	SRR2545915	Juvenile tuber	7.910
SRP108465	SRR5643513	five period of Gastrodia elata	6.710
	SRR5643514	five period of Gastrodia elata	6.460
	SRR5643515	five period of Gastrodia elata	5.200
	SRR5643524	five period of Gastrodia elata	6.930
	SRR5643525	five period of Gastrodia elata	5.160
	SRR5643528	five period of Gastrodia elata	5.340
	SRR5643658	five period of Gastrodia elata	4.770
	SRR5643659	five period of Gastrodia elata	3.260
	SRR5643660	five period of Gastrodia elata	2.780
	SRR5643661	five period of Gastrodia elata	4.260
	SRR5643662	five period of Gastrodia elata	4.350
	SRR5643663	five period of Gastrodia elata	2.570
	SRR5643664	five period of Gastrodia elata	3.320
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.410
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	7.410
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.080
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.780
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.790
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.330
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.340
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.960
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.710
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.890
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.890
SRP279888	Gastro	Gastrodia elata tuber	3.06
	Juven	Juvenile tuber	3.80
	Mother_Gastro	Mother tuber of Gastrodia elata	15.37
	Mother_Juven	Mother tuber of Juvenile	4.92