Detail information of GWHGAAEX007388/evm.TU.scaffold_2.217


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25680Predicted membrane protein
nrgi|672118904|ref|XP_008782675.1|0PREDICTED: transmembrane protein 87B-like [Phoenix dactylifera]
trEMBLtr|M0TC38|M0TC38_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P32440_001}
TAIRAT1G616700Lung seven transmembrane receptor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001098451249890296+
Transcript Sequence

Network for GWHGAAEX007388

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06814.12Lung_7-TM_R1784641.20E-106
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.040
SRR2545915Juvenile tuber34.160
SRP108465SRR5643513five period of Gastrodia elata31.210
SRR5643514five period of Gastrodia elata31.070
SRR5643515five period of Gastrodia elata30.380
SRR5643524five period of Gastrodia elata30.450
SRR5643525five period of Gastrodia elata37.860
SRR5643528five period of Gastrodia elata40.660
SRR5643658five period of Gastrodia elata47.850
SRR5643659five period of Gastrodia elata34.610
SRR5643660five period of Gastrodia elata34.420
SRR5643661five period of Gastrodia elata30.720
SRR5643662five period of Gastrodia elata30.680
SRR5643663five period of Gastrodia elata32.140
SRR5643664five period of Gastrodia elata31.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.010
SRR6049655Rhizomagastrodiae_C368-T10_good_127.950
SRR6049656Rhizomagastrodiae_C368-T07_good_135.440
SRR6049657Rhizomagastrodiae_C368-T07_good_135.100
SRR6049658Rhizomagastrodiae_C368-T04_good_135.820
SRR6049659Rhizomagastrodiae_C368-T04_good_145.420
SRR6049660Rhizomagastrodiae_C368-T01_good_139.630
SRR6049661Rhizomagastrodiae_C368-T04_good_139.630
SRR6049662Rhizomagastrodiae_C368-T01_good_134.870
SRR6049663Rhizomagastrodiae_C368-T01_good_138.920
SRR6049664Rhizomagastrodiae_C368-T10_good_134.320
SRR6049665Rhizomagastrodiae_C368-T10_good_134.320
SRP279888GastroGastrodia elata tuber 24.67
JuvenJuvenile tuber26.63
Mother_GastroMother tuber of Gastrodia elata 21.47
Mother_JuvenMother tuber of Juvenile 16.90