Detail information of GWHGAAEX007392/evm.TU.scaffold_2.223


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|242088277|ref|XP_002439971.1|5.96E-27hypothetical protein SORBIDRAFT_09g023650 [Sorghum bicolor]
Swissprottr|Q9C9Z5|NDUA1_ARATH4.00E-29NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
trEMBLtr|C5YZU8|C5YZU8_SORBI2.00E-27Putative uncharacterized protein Sb09g023650 {ECO:0000313|EMBL:EES18401.1}
TAIRAT3G086102.00E-28Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101019965410224452+
Transcript Sequence

Network for GWHGAAEX007392

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15879.4MWFE6571.60E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03945NDUFA1 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms51.070
SRR2545915Juvenile tuber66.240
SRP108465SRR5643513five period of Gastrodia elata50.980
SRR5643514five period of Gastrodia elata62.820
SRR5643515five period of Gastrodia elata52.920
SRR5643524five period of Gastrodia elata67.030
SRR5643525five period of Gastrodia elata29.630
SRR5643528five period of Gastrodia elata62.070
SRR5643658five period of Gastrodia elata52.090
SRR5643659five period of Gastrodia elata61.600
SRR5643660five period of Gastrodia elata50.390
SRR5643661five period of Gastrodia elata64.980
SRR5643662five period of Gastrodia elata54.460
SRR5643663five period of Gastrodia elata65.520
SRR5643664five period of Gastrodia elata58.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.580
SRR6049655Rhizomagastrodiae_C368-T10_good_157.740
SRR6049656Rhizomagastrodiae_C368-T07_good_133.620
SRR6049657Rhizomagastrodiae_C368-T07_good_123.490
SRR6049658Rhizomagastrodiae_C368-T04_good_122.410
SRR6049659Rhizomagastrodiae_C368-T04_good_118.880
SRR6049660Rhizomagastrodiae_C368-T01_good_121.310
SRR6049661Rhizomagastrodiae_C368-T04_good_119.430
SRR6049662Rhizomagastrodiae_C368-T01_good_136.620
SRR6049663Rhizomagastrodiae_C368-T01_good_133.330
SRR6049664Rhizomagastrodiae_C368-T10_good_161.790
SRR6049665Rhizomagastrodiae_C368-T10_good_161.790
SRP279888GastroGastrodia elata tuber 32.29
JuvenJuvenile tuber12.26
Mother_GastroMother tuber of Gastrodia elata 18.47
Mother_JuvenMother tuber of Juvenile 9.68