Detail information of GWHGAAEX007397/evm.TU.scaffold_2.233


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00774.00E-61Vesicle coat complex COPII, GTPase subunit SAR1
nrgi|743784128|ref|XP_010921580.1|4.27E-63PREDICTED: GTP-binding protein SAR1A [Elaeis guineensis]
Swissprottr|O04834|SAR1A_ARATH1.00E-61GTP-binding protein SAR1A
trEMBLtr|A0A067H577|A0A067H577_CITSI2.00E-62Uncharacterized protein {ECO:0000313|EMBL:KDO87024.1} (Fragment)
TAIRAT4G020804.00E-61secretion-associated RAS super family 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101045085110472195-
Transcript Sequence

Network for GWHGAAEX007397

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00025.20Arf721741.70E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07953SAR1 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName
GO:0006886Biological Processintracellular protein transport
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.040
SRR2545915Juvenile tuber11.790
SRP108465SRR5643513five period of Gastrodia elata0.230
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.450
SRR6049655Rhizomagastrodiae_C368-T10_good_18.050
SRR6049656Rhizomagastrodiae_C368-T07_good_121.630
SRR6049657Rhizomagastrodiae_C368-T07_good_128.320
SRR6049658Rhizomagastrodiae_C368-T04_good_148.900
SRR6049659Rhizomagastrodiae_C368-T04_good_160.550
SRR6049660Rhizomagastrodiae_C368-T01_good_141.000
SRR6049661Rhizomagastrodiae_C368-T04_good_142.690
SRR6049662Rhizomagastrodiae_C368-T01_good_119.470
SRR6049663Rhizomagastrodiae_C368-T01_good_140.540
SRR6049664Rhizomagastrodiae_C368-T10_good_16.870
SRR6049665Rhizomagastrodiae_C368-T10_good_16.870
SRP279888GastroGastrodia elata tuber 3.03
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 3.19
Mother_JuvenMother tuber of Juvenile 0.00