Detail information of GWHGAAEX007404/evm.TU.scaffold_2.243


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG40541.00E-33Uncharacterized conserved protein
nrgi|743778026|ref|XP_010919461.1|2.86E-58PREDICTED: uncharacterized protein LOC105043584 [Elaeis guineensis]
trEMBLtr|M0RUB5|M0RUB5_MUSAM1.00E-51Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P21850_001}
TAIRAT5G515101.00E-33Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101076445510780469+
Transcript Sequence

Network for GWHGAAEX007404

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07086.11Jagunal101537.60E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007029Biological Processendoplasmic reticulum organization
GO:0005789Cellular Componentendoplasmic reticulum membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms34.250
SRR2545915Juvenile tuber37.930
SRP108465SRR5643513five period of Gastrodia elata27.480
SRR5643514five period of Gastrodia elata24.160
SRR5643515five period of Gastrodia elata28.000
SRR5643524five period of Gastrodia elata24.820
SRR5643525five period of Gastrodia elata39.760
SRR5643528five period of Gastrodia elata30.470
SRR5643658five period of Gastrodia elata33.580
SRR5643659five period of Gastrodia elata19.600
SRR5643660five period of Gastrodia elata17.370
SRR5643661five period of Gastrodia elata19.260
SRR5643662five period of Gastrodia elata23.360
SRR5643663five period of Gastrodia elata20.950
SRR5643664five period of Gastrodia elata20.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.690
SRR6049655Rhizomagastrodiae_C368-T10_good_146.550
SRR6049656Rhizomagastrodiae_C368-T07_good_131.820
SRR6049657Rhizomagastrodiae_C368-T07_good_128.050
SRR6049658Rhizomagastrodiae_C368-T04_good_140.010
SRR6049659Rhizomagastrodiae_C368-T04_good_136.610
SRR6049660Rhizomagastrodiae_C368-T01_good_133.880
SRR6049661Rhizomagastrodiae_C368-T04_good_127.440
SRR6049662Rhizomagastrodiae_C368-T01_good_132.060
SRR6049663Rhizomagastrodiae_C368-T01_good_132.420
SRR6049664Rhizomagastrodiae_C368-T10_good_131.410
SRR6049665Rhizomagastrodiae_C368-T10_good_131.410
SRP279888GastroGastrodia elata tuber 28.03
JuvenJuvenile tuber21.00
Mother_GastroMother tuber of Gastrodia elata 48.82
Mother_JuvenMother tuber of Juvenile 29.57