Detail information of GWHGAAEX007409/evm.TU.scaffold_2.248


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|449525339|ref|XP_004169675.1|8.64E-36PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Cucumis sativus]
Swissprottr|P32295|ARG7_VIGRR2.00E-11Indole-3-acetic acid-induced protein ARG7
trEMBLtr|A0A0A0KFM7|A0A0A0KFM7_CUCSA3.00E-36Uncharacterized protein {ECO:0000313|EMBL:KGN46526.1}
TAIRAT2G466902.00E-34SAUR-like auxin-responsive protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101086637510871647-
Transcript Sequence

Network for GWHGAAEX007409

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.13Auxin_inducible16806.70E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733Biological Processresponse to auxin

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.470
SRR2545915Juvenile tuber33.070
SRP108465SRR5643513five period of Gastrodia elata57.250
SRR5643514five period of Gastrodia elata126.030
SRR5643515five period of Gastrodia elata66.270
SRR5643524five period of Gastrodia elata125.250
SRR5643525five period of Gastrodia elata596.450
SRR5643528five period of Gastrodia elata403.960
SRR5643658five period of Gastrodia elata766.500
SRR5643659five period of Gastrodia elata22.670
SRR5643660five period of Gastrodia elata23.000
SRR5643661five period of Gastrodia elata19.280
SRR5643662five period of Gastrodia elata23.290
SRR5643663five period of Gastrodia elata11.680
SRR5643664five period of Gastrodia elata17.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.990
SRR6049655Rhizomagastrodiae_C368-T10_good_146.250
SRR6049656Rhizomagastrodiae_C368-T07_good_124.280
SRR6049657Rhizomagastrodiae_C368-T07_good_120.180
SRR6049658Rhizomagastrodiae_C368-T04_good_143.480
SRR6049659Rhizomagastrodiae_C368-T04_good_159.410
SRR6049660Rhizomagastrodiae_C368-T01_good_121.500
SRR6049661Rhizomagastrodiae_C368-T04_good_129.390
SRR6049662Rhizomagastrodiae_C368-T01_good_183.820
SRR6049663Rhizomagastrodiae_C368-T01_good_140.740
SRR6049664Rhizomagastrodiae_C368-T10_good_150.760
SRR6049665Rhizomagastrodiae_C368-T10_good_150.760
SRP279888GastroGastrodia elata tuber 10.26
JuvenJuvenile tuber8.60
Mother_GastroMother tuber of Gastrodia elata 81.50
Mother_JuvenMother tuber of Juvenile 57.26