Gene detail

Detail information of GWHGAAEX007411/evm.TU.scaffold_2.252

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0242	Kinesin-like protein
nr	gi\|743777920\|ref\|XP_010919401.1\|	PREDICTED: kinesin-like protein NACK2 isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q8S905\|NACK1_ARATH	Kinesin-like protein NACK1
trEMBL	tr\|W5AVK1\|W5AVK1_WHEAT	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT3G51150	ATP binding microtubule motor family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000010	10940112	10945501	-

Transcript Sequence
>GWHTAAEX007411 ATGGGAGCTGCTGCTGCTGCTGGGGAGGAGATGCAGCAATGGGATGCAGAGAGTGGGGAGAAGATAGAGAGGATTTTTGTTTCCGTGAGACTGAGGCCGCTGAGCCAGAGGGAGATCTTGGCAAACGATCCGTCTGACTGGGAATGCATCAATGACTCAACCATAATATTCAGAAACAGCTTCCCCGAAAGGCACGCGACTCCCATTGCCTACTCATTCGATAGAGTGTTTGGAAGTGAATGCAGCACAAACCAAGTTTATGAGGAAGCAGCAAAAGAGGTTGCCCTTTCAGTTGCTAGTGGCATCAACTCAAGCATCTTTGCCTATGGCCAAACGAGCAGTGGGAAGACATACACCATGACCGGAATCACGGAGCATACCGTTGCCGATATCTATGACTACATAAAGAGGCATCCAGAGAGAGCTTTTGCATTAAAGTTTTCTGCGATCGAAATTTATAATGAAGCTGTGAGAGATCTCCTCAGCATGGATGGAACGCATCTCAGGCTTCTTGATGATCCTGAGAGAGGGACCGTTGTGGAGAAACTTACAGAGGAAACACTGCGCGACTGGGATCATTTAAAAGCGCTGCTTTCTCTGTGCGAAGCTCAAAGAAGAATAGGAGAAACTTCATTGAATGAAATGAGTTCAAGATCCCATCAAATACTAAGACTGACAATTGAAAGCTCTGCTCGTGAATTTTTGGGAAAAGACAATACAACTACGCTTTCCGCCAGTGTGAACTTTGTAGATCTTGCAGGAAGTGAGCGTGCATCTCAGGCATTATCTGTTGGTGCAAGGCTGAAAGAAGGCTGCCACATTAATCGCAGTTTACTCACTCTAGGAACTGTTATTCGTAAGCTAAGTAAAGGAAGAAACGGCCACATCCCGTATCGAGAATCGAAACTGACACGAATATTACAGCCTTGTTTAGGAGGCAATGCTAGAACAGCCATTATTTGCACAATTTGTCCTGCTAGAAGTCATATTGAGCAATCGAGAAACACACTTCTGTTTGCAAGTTGCGCCAAAGAAGTTGTCACCAGTGCTCAGGTCAATGTTGTGATGTCTGATAAGGCACTGGTCAAGCATTTGCAGAAGGAACTGGCCAGGTTGGAGAATGAGCTGAGGTGCCCGGGATCAGCCTCTAATTTCAGTCATTTTGAAGCATTATTGAAGGAGAAAGATGCTCGAATAAAAAATTTGGAGAAGGAAATTAAGGAGGCGATTCAGCAGCGCAACTTAGCCCAATCTCGAATAGAGGATCTCTTACACGTGCTTGGGGATGATCATTCTTCAAGACAATGGGAAGAATCCTCCATAAACTGTACCCCAAAATTACATACATCTAATGCCTATGATGAGGAAATTTCAGTGCCTGATCCAAGAGAAGCTGCCTACCACAGCTCAAATTCCAGGTTTTTCAAGTTAAGAAAGTATCAGAGCAGAAACCACAGCAGAAATAACCATTCGATTATAGAAGATAATGAAAATGAGGATTTCCCCCCAACGCTCTCTCAAAGCAAGCGTGGATCAAATGGATGGATTCCCAATCGCGCAGAAGAAGCTTATGATCATGATGATGGCTCTGAAGATTCTGAGGAACTTTGCAAGGAAGTGAGGTGTATTGAGATGGATGGATCAAACCAAAGAGAAAGCTTAGATTTTTCATTCTCAGAAGTAAAGGAAAGCCAGCCAACGAACCAGCCTTCTAATGCTTTCGTGAATGGAGGACTTACCAAATTGGGCTCAACACCTGGCACTGGTTCTACCTTTTTGACACTAGAACATCATCTCCACAGCATTCGGGCATCACATCCTGATGACTCTCTCACACGGGCTTCAGCTCGAGATTCACATAGCTCTCAGATCATGTTAATGAGGAGAAGCAGAAGTTGCAGGGTAGAGCTTTTGACAGAACAGTATGACTGCACGCCCCCTCAAATTTCGTTGAGAGATTTCCCGGGCAGGCCGTCAGCGCTTCAAGAACGAGAGAATTACGATGCTAAAAATCGATACTTTTCAAATGAATCTGTAATGCAGGAGCGCATTGATTCGGATATCATGACTAAAGAGCAAGATGATATGTCTGCTTCTAAAGAAGGCATCACCACCATCCAGGACTTTGTTTCAGGATTGAAAGAGATGGTTCAGGATCTCGACGGGACTGCAAGCGAAGCGTGTGGAGCCGAAGGGATGAGAAAGAGCATCGGCCTCGATCCGATCCCAGGCCCCATGGATACCATATCCAATTGGCAAGAGAACTTTGATAAGAAGCAGCAACAGATAATTGAACTCTGGCATGACTGCAATGTCTCGTTGATTCACAGAACCTACTTTTTCATGCTCTTCAAAGGTGATCCTACCGATTTGATCTACATGGAAGTAGAGCTCAGGAGGCTGTCGTTCCTAAAAATAACATTTTCTCAGAGAAATTTTTCCATAGTATCTGGTGAGACCGGACGGAATGAGACTCTAGTTTCAAGCTTGAGGACTCTACAGCGGGAGCGCGAGATACTCTGCAGGCAAATGAAGAAGCGATTGTCGACGGAAGAGCGGCTGAGCCTTTATGTGAAATGGGGAATCTCACTGAGCTCAAAGCAGAGGCGAGTTCAGCTGGCTCGTCTGCTTTGGACCGACGCCCGTGATCTGGAACATGTCAGGGAGAGTGCTTCGACAGTTGCAAAGGTTATTGGGCTGTTTGAATCAGAAGGGCAGTTTCTCAAAGAGATGTTTGGCCTCAGCTTTCTGCCTCAGAGTTCATTCAGAAGGCCAAACAGATGGAGGCGCATGGGAGATCTATAG

Network for GWHGAAEX007411

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	30	346	3.40E-93
PF11995.7	DUF3490	755	918	2.20E-69

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0008017	Molecular Function	microtubule binding
GO:0003777	Molecular Function	microtubule motor activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	14.160
SRP064423	SRR2545915	Juvenile tuber	43.970
SRP108465	SRR5643513	five period of Gastrodia elata	32.990
	SRR5643514	five period of Gastrodia elata	35.240
	SRR5643515	five period of Gastrodia elata	30.820
	SRR5643524	five period of Gastrodia elata	37.030
	SRR5643525	five period of Gastrodia elata	50.900
	SRR5643528	five period of Gastrodia elata	36.340
	SRR5643658	five period of Gastrodia elata	99.280
	SRR5643659	five period of Gastrodia elata	26.620
	SRR5643660	five period of Gastrodia elata	21.200
	SRR5643661	five period of Gastrodia elata	19.940
	SRR5643662	five period of Gastrodia elata	25.100
	SRR5643663	five period of Gastrodia elata	37.460
	SRR5643664	five period of Gastrodia elata	26.360
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	26.580
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	36.830
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	29.690
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	22.770
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.140
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.840
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	22.680
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	21.990
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	31.380
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	23.770
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	29.910
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	29.910
SRP279888	Gastro	Gastrodia elata tuber	23.74
	Juven	Juvenile tuber	26.92
	Mother_Gastro	Mother tuber of Gastrodia elata	16.00
	Mother_Juven	Mother tuber of Juvenile	23.00