Detail information of GWHGAAEX007415/evm.TU.scaffold_2.256


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743828062|ref|XP_010933758.1|0PREDICTED: endophilin-A2-like [Elaeis guineensis]
trEMBLtr|V7AQT4|V7AQT4_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW07924.1}
TAIRAT4G346602.00E-143SH3 domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000101100491811045281-
Transcript Sequence

Network for GWHGAAEX007415

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14604.5SH3_93073555.20E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms67.790
SRR2545915Juvenile tuber72.810
SRP108465SRR5643513five period of Gastrodia elata46.660
SRR5643514five period of Gastrodia elata35.820
SRR5643515five period of Gastrodia elata36.160
SRR5643524five period of Gastrodia elata32.430
SRR5643525five period of Gastrodia elata19.230
SRR5643528five period of Gastrodia elata20.830
SRR5643658five period of Gastrodia elata16.830
SRR5643659five period of Gastrodia elata64.420
SRR5643660five period of Gastrodia elata77.340
SRR5643661five period of Gastrodia elata73.580
SRR5643662five period of Gastrodia elata82.800
SRR5643663five period of Gastrodia elata77.970
SRR5643664five period of Gastrodia elata91.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.450
SRR6049655Rhizomagastrodiae_C368-T10_good_152.790
SRR6049656Rhizomagastrodiae_C368-T07_good_135.950
SRR6049657Rhizomagastrodiae_C368-T07_good_146.200
SRR6049658Rhizomagastrodiae_C368-T04_good_134.640
SRR6049659Rhizomagastrodiae_C368-T04_good_139.640
SRR6049660Rhizomagastrodiae_C368-T01_good_135.160
SRR6049661Rhizomagastrodiae_C368-T04_good_136.040
SRR6049662Rhizomagastrodiae_C368-T01_good_127.190
SRR6049663Rhizomagastrodiae_C368-T01_good_129.980
SRR6049664Rhizomagastrodiae_C368-T10_good_134.250
SRR6049665Rhizomagastrodiae_C368-T10_good_134.250
SRP279888GastroGastrodia elata tuber 78.86
JuvenJuvenile tuber65.25
Mother_GastroMother tuber of Gastrodia elata 27.47
Mother_JuvenMother tuber of Juvenile 37.19