Gene detail

Detail information of GWHGAAEX007416/evm.TU.scaffold_2.257

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0242	0	Kinesin-like protein
nr	gi\|743777858\|ref\|XP_010919370.1\|	0	PREDICTED: kinesin-like protein KIF3A isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q8S950\|NACK1_TOBAC	1.00E-80	Kinesin-like protein NACK1
trEMBL	tr\|F6I199\|F6I199_VITVI	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT4G39050	0	Kinesin motor family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000010	11054160	11082575	-

Transcript Sequence
>GWHTAAEX007416 AAAAAAAAAACACAAAAAGGAGAAATCATTGTTTTTCTTCCTGCCCTCCAAAAATCCCTCTTCTTCCCTTCTTCGACGGCTTGCCTACTCTTTACACTGATCACTCCAGCTACAGAATTTTCCATCGCTCGCTGTCTCTCGGCACCCGGTGTCTCTTCCACATACCCGCATTGGTTGCTTATTAAAGGGGCAACCTCCGCCTCTTCACTTTTCGTCGTTATTTATGACCCGAGCATGTGACATCTGACGAGTTGGTTCCTTCTTCTGCTTCCCCATCTGTACTCTGTTCCGGATCTTTCTTTCCGTCGCTTTCGCGCATCAATGGCGGGGCCTCTGTTCTCCTCCTCCTCGTCGAGGGCCAGGAGCAGCTCGCCATTCAGCCATCGGAGGCCTCTCACAAGCTCCTACTCCTCCTCGTCTTCTTCGGCTTCGTCATTTATAAACGGGCGGATCATTCCGCGCTCATCCCCGTCTTCCGTGTCGTCTAATTTCCATTCTTGCGGCGGGGTTCCTAGATCTGTCACGCCGAACCGCGGCCGCAACGATTACTCCCGAAGCCGCCCGGCGATCGGCTTCGTCTCCTCCGAAGAACTCGCCATGGATGCTGGTGATGCAACGAGTTCTGCGGATAGCATCACCGTGACCGTCAGGTTTCGGCCGTTGAGTGAGAGGGAGTTCCAGCGAGGAGATGAGATCGCGTGGTATGCGGATGGCGATAAAGTTGTGCGGTGCGAGTATAATCCGGCCACATCTTATGCCTTTGATAGAGTTTTTGGCCCATCCACAACATCTCAAGTGATCTATGATGTTGCTGCTCGGCCTGTCGTGAAAGCAGCAATGGAAGGCATTAACGGGACTGTTTTTGCATATGGTGTAACTAGCAGCGGAAAGACCCACACAATGCATGGGGATCAAATTTGTCCAGGTATTATACCATTGGCCATCAAGGACGTCTTCAGTATTATTCAAGATACTCCGGGGAGAGAATTCTTGCTTCGTGTCTCATACCATGAAATATATAATGAGGTTATAAATGATTTGCTTGATCCAACAGGTCAAAATTTGCGTGTTAGAGAAGATACCCAGGGAACTTATGTTGAGGGTATAAAAGATGAAGTTGTTTTATCTCCTGGACATGCGCTTTCTTTCATTGCGGCTGGTGAAGAGCATCGTCATGTTGGTTCAAACAATTTCAACTTATTTAGCAGTCGAAGTCATACTATATTTACATTGATGATAGAAAGTAGTGCGCGTGGGGATGAATATGATGGAGTGATGTATTCTCAACTTAACCTAATTGATTTAGCAGGTTCTGAAAGTTCGAAAACTGAGACAACTGGACTACGAAGAAAGGAAGGATCTTATATTAATAAAAGCCTCTTAACCCTTGGAACGGTAATTGGGAAGCTCAGTGAGGGAAGGGCAACTCATATACCTTACCGTGATTCCAAGCTGACTCGCCTTCTACAGTCATCGCTGAGCGGGCATGGACTTGTTTCTCTTATCTGCACTGTTACTCCTGCATCTAGCAACATGGAGGAAACACATAATACATTGAAGTTTGCAAGCAGAGCAAAAAGAGTCGAGACTTACGCATCTCGAAATAGAATTATTGATGAGAAGTCTTTGATTAAGAAGTATCAAAAAGAAATATCAACTTTGAAGCAAGAGCTTGAGCAGCTTAAAAGAGGGATGATTACTGGTATCAATCAAGAAGAAATCATAAGCTTGAAACAGAAGCTGGAAGAGGGTCAAGTAAAGATGCAGTCTCGTCTGGAAGAGGAAGAAGAAGCAAAGGCTGCTCTAATGAGTAGAATACAGAGATTAACAAAGCTTATTTTAGTATCTACTAAAAATACAATTCCTGGATGTGGTGGTGATTTGTCTGCTCATCAGCATCACAATTCTTTTGGTGCCGATGAAAAGTTGCAAATTTTTGGTGAGAATCTACCACTATTTCCAGAAACAGAGGGAACGCTGATAGACCCTATAACTACACCTGCGTCAGGTTCAGTGGATCTACTTCATGATAAATTTTCAGGATCTTTAAGCAAGTTTGGAGACACACCCTCATCAGCCATGTCAATGTCAGATCAAATTGATCTACTTGAGGAGCAGGTAAAAATGGTCACCGGTGAGATCGCACTGAGTCACAGTACACTGAAACGACTTGCAGAACAATCTGCAGATGATCCTGACAACACCAAAATTCAGTTACAGATTCAAAATTTGGAAAGAGAAATTGAGGACAAAAAAAATCAAACGAGGGTATTAGAACAGCGCATTATAGATAGCAAGGAAGCCTCAACAGCAAATGCTTCTTTGGTTGATATGCAGCAGACTGTCATGAGATTGATGGCACAGTGCAATGAGAAGGGATTTGAGCTAGAGATAAAGTCGGCGGATAATCGGATTCTTCAGGAACAACTCACTAAAAAGTGTTCCGAAAATAATGAACTGCAGGAGAAGCTCCTGCAGCTGCAGCAGCAGCTCCAGTCGATAAGCGAAGCGCCGTGCTTAAATCAGGAACAGAGCGCGGACAAGGAAGTTGGCGAGTTCAGGTGTAAACTGCAGCTGATGGAGCTGAAAAGCAGCAGGCTCGGCCAGGAGCGTGTCCAGCTTAACGAGCAGAACCGCTTGCTGCTTGACGAGAACCAGAGGCTGTCGGAAGAAGCTTCTTACGCAAAAGAATTGGCCTCGGCCGCCGCCGATGAGCTCAAGAATCTAACCGAGGAGATTACCAAGCTCTCCCTGCAAAACGCCAGGCTGGGTAAAGAACTCTCCGCCGCTCGGAAGCCGCACTCGGATGACAGAAACGAAGGAGGAATCGTTAAATTGGGCAGAAAGGCGCGGCACGATGATGATTTGGACGGCTTGAGGGCGAAGCTTCAGGCGGCGAAGCACAGAGAAGCCGCTCTGGAGGCCGCGTTGGCGGAAAGGGAGCTCCTCGAGGGAGAATACTGCGGGAGATTGGAGGAGTCGAAGAAGAGGGAGTCAGCTTTGGAGAACGATTTGGCTGGCATGTGGGTTCTCGTCGCCAAGCTGAGGAAGGGTGCGCTGAGCGAGTCCGACCTGCTGAACGCCGATGATCAGAAAGAGAACAGAACTGAGGCAGAAGACCGTCTCTCCAAAGACATACACGTCGTCCAAAGGCAGCAGACTAAGCCCGTGAACGATCAGTTTAATACCCCTAATCCTGAGTTGGAACCCATGCTCTCGCGCTTGAAGGCGCGAATACAAGAGATGAAGGAGAAAGATATGCTGCACTCCTTGGGGAATGGCGACTCAAATTCTCACGTCTGTAAAGTCTGTTTTGAATCGCCAGCCGCCGCCGTGCTGCTTCCTTGCCGGCATTTCTGTCTTTGTAAGCCCTGCTCTTTTGCTTGTTCGGAGTGCCCTCTGTGCAGGACGATGATCTCGGATAGGATTATTACTTTTACGTCTTGAGCTTGCTCGAATGCCCGCGCTGCGTATATATAAAATGCCCCTCTACGTTGGTGCGCCTCGCCGGTCTCCAAAGGAAGTAATTTTGATATTTTTCCGCAATTCGATCAATAGTGTTGCAATTCTTTCTCGTGCCGTTTAGAGTTCTTTCAGCTTGTTCGTCCCGTTATATATTGCAAGTTTCGTGTAAAAGCTACCCGTTGCCCTCCTGAATTTAGTTGTATACAGCTATCGCCAGAAATTATTGGTGCGATCTATTAAGCTTCAAAAGAAAAAATCACCGAAAGTAATCTCTTGGCTGCTGAAGATTAGTTCAAATGGAATAAATTGAGTTATTGGGTTTAAATTGGGATCAAATTGAATGTTGATGCACAATATTGAATAGTGCATGATCAAATTGATGAAATCGAAATAGGCAGGATACTTTTTGGCAATTTTCTTAAAAGTAGAATGTGATGCCAAATTACTTAACCTCCTATCTTATGTATGATTTTCATTTTCTTTTTTTTTTCTGAAGGGATTAATAATTTGTTAGGTTGCCTTTTTGTGCAAGTAAAATATATATGATTCATTCAATAATGAAGATATCTTACAGAAAATTGAATTTGGA

Network for GWHGAAEX007416

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	110	421	1.50E-99
PF13920.5	zf-C3HC4_3	992	1034	9.50E-10

Protein Sequence

>GWHPAAEX007416
MAGPLFSSSSSRARSSSPFSHRRPLTSSYSSSSSSASSFINGRIIPRSSPSSVSSNFHSCGGVPRSVTPNRGRNDYSRSRPAIGFVSSEELAMDAGDATSSADSITVTVRFRPLSEREFQRGDEIAWYADGDKVVRCEYNPATSYAFDRVFGPSTTSQVIYDVAARPVVKAAMEGINGTVFAYGVTSSGKTHTMHGDQICPGIIPLAIKDVFSIIQDTPGREFLLRVSYHEIYNEVINDLLDPTGQNLRVREDTQGTYVEGIKDEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSARGDEYDGVMYSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGRATHIPYRDSKLTRLLQSSLSGHGLVSLICTVTPASSNMEETHNTLKFASRAKRVETYASRNRIIDEKSLIKKYQKEISTLKQELEQLKRGMITGINQEEIISLKQKLEEGQVKMQSRLEEEEEAKAALMSRIQRLTKLILVSTKNTIPGCGGDLSAHQHHNSFGADEKLQIFGENLPLFPETEGTLIDPITTPASGSVDLLHDKFSGSLSKFGDTPSSAMSMSDQIDLLEEQVKMVTGEIALSHSTLKRLAEQSADDPDNTKIQLQIQNLEREIEDKKNQTRVLEQRIIDSKEASTANASLVDMQQTVMRLMAQCNEKGFELEIKSADNRILQEQLTKKCSENNELQEKLLQLQQQLQSISEAPCLNQEQSADKEVGEFRCKLQLMELKSSRLGQERVQLNEQNRLLLDENQRLSEEASYAKELASAAADELKNLTEEITKLSLQNARLGKELSAARKPHSDDRNEGGIVKLGRKARHDDDLDGLRAKLQAAKHREAALEAALAERELLEGEYCGRLEESKKRESALENDLAGMWVLVAKLRKGALSESDLLNADDQKENRTEAEDRLSKDIHVVQRQQTKPVNDQFNTPNPELEPMLSRLKARIQEMKEKDMLHSLGNGDSNSHVCKVCFESPAAAVLLPCRHFCLCKPCSFACSECPLCRTMISDRIITFTS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0008017	Molecular Function	microtubule binding
GO:0003777	Molecular Function	microtubule motor activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.110
SRP064423	SRR2545915	Juvenile tuber	15.360
SRP108465	SRR5643513	five period of Gastrodia elata	17.490
	SRR5643514	five period of Gastrodia elata	14.400
	SRR5643515	five period of Gastrodia elata	15.220
	SRR5643524	five period of Gastrodia elata	15.090
	SRR5643525	five period of Gastrodia elata	14.310
	SRR5643528	five period of Gastrodia elata	11.610
	SRR5643658	five period of Gastrodia elata	16.580
	SRR5643659	five period of Gastrodia elata	19.520
	SRR5643660	five period of Gastrodia elata	17.590
	SRR5643661	five period of Gastrodia elata	17.850
	SRR5643662	five period of Gastrodia elata	15.300
	SRR5643663	five period of Gastrodia elata	17.940
	SRR5643664	five period of Gastrodia elata	14.400
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	15.430
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.390
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	17.370
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	15.030
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	14.340
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.190
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	16.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	16.610
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	18.560
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	15.390
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.030
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.030
SRP279888	Gastro	Gastrodia elata tuber	11.68
	Juven	Juvenile tuber	20.80
	Mother_Gastro	Mother tuber of Gastrodia elata	9.86
	Mother_Juven	Mother tuber of Juvenile	9.77