Gene detail

Detail information of GWHGAAEX007417/evm.TU.scaffold_2.259

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672136042\|ref\|XP_008791702.1\|	0	PREDICTED: LOW QUALITY PROTEIN: formin-like protein 3 [Phoenix dactylifera]
Swissprot	tr\|Q9C6S1\|FH14_ARATH	0	Formin-like protein 14
trEMBL	tr\|B9S1L1\|B9S1L1_RICCO	0	DNA binding protein, putative {ECO:0000313\|EMBL:EEF42480.1}
TAIR	AT1G31810	1.00E-177	Formin Homology 14

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000010	11112849	11143365	+

Transcript Sequence
>GWHTAAEX007417 ATATACTATAAGGGTTTAGGGTCAAATCAAGCGACAATAGAATACTCGGAGCGCCGATTGCGTCTCGAGTATCGCACCTTCCGGCTTTTACCACAGAGGAGCGAACGTTCTTCCGACCACCAGTTCGTGGCTGATCGTCGCAGATTATCGCAGATCGTCACAATCCAGTCTTCGCAGCAGGGCTAGTCAATTGGTATCTGGTCTTCCCATGTGAATCAATGTCTCTCTTAAGCAGGTTGTTTTACAGAAGACCACCTGATGGCTTGCTTGAATTTGCTGAGAGGGTTTATGTTTTTGATTCATGCTTCTCAACTGAGGTTTTGTCTGATGGAGTGTATCAAATCTACTTGTCAGAAATTGTAACAGAGTTATATGAAGTATGCCCAGATTCTTCTATTCTTGCTTTTAATTTTAGAGAAGGAGGAAAAAGGAGCAAATTTGCACAGATTATTGCTGAGTATGATGTTACTGTCATTGATTATCCACGGCAATATGAGGGGTGCCCTATTCTTCCTTTATCCGTTGTCCATCATTTTCTTCGTATTTTTGAAAGTTGGCTTTTTGAGGGATATAATCAAAATATTGTGTTACTGCATTGTGAGAGGGGAGGTTGGCCACTCTTAGCATTTCTACTGGCAAGTTTACTTATTTTCAGAAAGTTGCATCATGGAGAGCAGCGCACTCTTCAAGCTGTCCACCGGGAAGCTCCTAAAGGGCTTCTACAACTTCTATCTCCACTAAATCCTTTGCCTTCTCAGCTTCGTTATTTACAATATGTAGCTCGAAGGAATATATCTCGTGAGTGGCCCCCTAGTGAACGGGTACTTTCTTTGGATTGCATCATTCTTCGATCTATTCCAAACTTTGATTCAGATAAGGGTTGCAGACCATTTGTTCGTATATTTGGCCAATATCCACATAACCCAAATCGTATTGAAAGGAACACGCTGTTTTCAATGTCCAAGAAGAAGAAATCATTACGACACTACAGTCAGGAAGATTTTGGAGTTATTAAGATTGATATCCGTTGTTTAGTTCAGGGTGACCTTGTCCTGGAATGTGTTCATTGGAATTTAGATCCTGAAAGGGAGGTAATGATGTTTCGTGTCATGTTTAATACTGCTTTCATTAGGTCAAACATTTTGATCTTGAGCTACGAGGACATTGATATTCTATGGGATGCAAAGGGAAGATATCCTAAAAGTTTTCGAGCAGAGATTTTGTTTGGTGAAGTGGACAATGTCTCTTCTCCAATGACTCCAACAACAACTTTGAATGGCGAGGCAATAGGAGGATTACCCATTGAGGCATTTTCTATGGTTCAGGACCTTTTTGATGGCACGGAGTGGGCAGAAAATAGTGAAGATGCAGCTTTTTGGTTGCTCAAACAAATATCCGCCAATGCTTTGCATGAAAGAATCGAAAATTTGATGCTAACTGATGTGAGAGACTTTTCTAGACAGCACAGCAAAGGAAGTGACGGAATGTCTTATGCTTCACCTTTTGATTCTGAGGAAGAAAAGGACTCCGTGACTTCCGATTCTGTAACTTCAGGGGACCATGAAAAAATTCAGCATGGAGCGATGATTAGCACTCCGTTAGAGGGCCTCCATGATGAACCTACATGTCAATATCCTGAATCGACAGGTTGCCTGCCATCAACTTCAGTCAATTCTATAAACGTAGCTAATCCTGCTTCGGCCCTAGTAATGCCTCTGCAATTTTTGCTAGCACCACAACCACAGCCAGCACTGCCACCATCGCCTCTTCTTTTGTCGTCACTAGGAAAATCTCTAGGACAACCAGCTCAATCTGATTCTGAAGTAGCCACATCTTTACCTCCCCCTCCACCTCTTCCAATGCCTAGTGGTGATTATCAACCTCCCCCAAATCCTCTAATACCCCCTTTCAGTTTGTCTAGCAAGGTTCTACCTCCACAGCATCCACCACCTGCGCCGCCTGCGCCGCCTGTGCCACCTGCGCCACCTGCGCCACCTGCGCCACCTCCGCCACCTTTGTCACAGACAAATTCTGCTTCGATGATGGTTTGCGTTCCACCATCACCATCACCACCTCCCCCTTCTTCAGCCACTAAGGTTCAGGCTCTCCCATTGCCGCCACCACCACCACCACTTCCTCAAAGTTCTGTTCATTCCAGTTCTAAGGCTACTGATAGGCCCCCATCACCACCTCCCCCACCTTCCACAACTTCAATACAAAATACTACTCCAGCCTCTCCCCCATCTCCCCTTCTATTATCTGGGCGGAATGTCCCAACTCCTCCAGCACCTCCAGCACCTCCCCTTTCAATTAGCAAGGGTCCCCCACCGCCACCTCCCCCTTCAATTAGCAAGGACCCCCTACCGCCACCTCCTTCGATTAGCAAGGGTCCCCCACCGCCACCTCCCCCACCTCATACAATATCTATACAAAAGGCCCCTCCAGTTCCACCTCCCCCACCTCATACAATATCTATACAAAAGGCCCCTCCAGTTCCACCTCCCCCACCTCATACAATATCTATACAAAAGGCCCCTCCAGTTCCACCTCCCCCACCTCATACAATATCTATACAAAAGGCCCCTCCAGTTCCACCTCCCCCTTCACTATCTGGATACAAAGCCCCAGTTCCTCCAACTCCTCCGCAGGCACCTAGAGTAGCAATTAAGGAAGTCCCTAATCCACCTCAGGTTTCTCGTGTAGAACCTCCGAGCATACCAACAGCGCTTCCATTTGCTGCAAGAGGTAAAGCTGTTGCAACTGGTTCAATGAGAGGCCATGCACTGACCAATTCACAAAAGAAAGGTTCATTAAAACCACTGCATTGGGTGAAAGTTACTAAAGCCATCCAAGGAAGCTTATGGGCTGATTCAAATAAATCTGAAAGCCAATCAAAGGCTCCTGAAATTGATATTTCAGAGTTAGAAAGTCTCTTTTCAACTGCTGTTGATAATGGCCGTGGCATGGATAAAGTTGTAGCTCGACGGGGAACAAATACTAACAAACCGGAGATCATTCACCTGGTTGACATGCGCAGAGCAAATAATTGTGAAATCATGCTGACAAAAATTACGATGCCACTTCCTAAAATGATAAATGCAGTTTTAATTTTGGATACAACAGCATTGGAGCTTGATCAAGTGGAAAATATTATCAAGTTTTGTCCATCAAAAGAAGAAATGGAAATGCTTAAGAATTACTCAGGAAATAGAGAGATACTTGGGAAATGTGAGCAGTTCTTTCTCGAGCTTATGAAGGTTCCTCGTGTTGAATCTAAGTTGAGGGTTTTTTCCTTCAGAATTTCTTTTTCCACACAGGTGAAGGAGCTACGGTCCATTCTGAACATCATTAACGACGCTTCCAACGAGGTAAAAAACTCGGTTAAGTTACGTCAAATAATGCAGACCATTCTTACCTTAGGAAATGCTTTGAATAAAGGAACAGCACGAGGGTCTGCAGTGGGCTTTAGATTGGATAGTCTTTTGAAATTGTCGGATACACGTGCAAGGAATAATAAAATGACATTAATGCATTATTTATGCAAGCTACTTGCTGAAAAGATGCCTGAGTTGCTGGACTTTAGTAAAGACTTGATTCATTTGGAAGCAGCATCTAAGATTCAATTAAAGATGGTGGCCGAAGAAATGCAAGCTGTGAGTAAAGGGCTTGAAAAGGTTGAACTAGAGCTTTCTGCATCAGAAAATGACGGAGAAATCTCATTAGGCTTTCGAAAGGCTTTAAAGAGCTTTCTTGATACAGCAGAAGCCGATGTGAGGTCACTCATATCGTTGTATAGTGAAGTGGGTAGAAGTGCAGATTCATTGGCTCAATATTTCGGAGAAGATCCTGCTCGTTGTCCGTTTGAGCAAGTTACTTCAATTTTGGTTGTGTTTGTCAACACCTTCAACAAATCTCATGAAGAAAACATCCGTAATGCCGAGGCTGAGAAGAAGAAACAAGAGATTGCTGAGAAGAAACTTGAGATGGCTGCCACGAAAGAGAAAGGAAATATTTCTGTTAAATGATATTTTTCATGAAATAGATAACAAAAAAATTCATTTAGTTTTCAACTGTTTGTTTGATGTGCGGGAAGTGCTGCAGACAAGTTTCCATGGGTAAAAGCTTCGGCTCCCTTTCACCCTCATTGTTCATAAATTTACAGGTTTCCATGATGTGAATGTTTTCATGCCTGTTAATCAGTCCTCTGCACATAGCAAGCAGCAAATTTTGAGTTATTTTAGATTTTCTGCAGTAAAAAAGTTCAGTGCATATAACCTATGGAGAGACTATATGCGCCAAATGTATTGTGATGTTGGTGCTTTATTAATAATGATGGTCAATTAATGTAGGGAAACTTGCATACATAACACACAAACCTGCATATTTGCACTTGCTGCTATCAAGCTAGTTGTGTATTTCACAAAAGAGAAAAACAGGTTGGGGTTTTTTGGGCTTTTCAATATGAAAATGGAAGCAGGAGGATGACGTCCCAGAAATATGCAAATTTGGAGTGGTATGTATGTAAAGATCCCAAGACTGTATGTAGCATTAAGCCATTCGTGGGGATTACTAATGTGATACTTATAAATTTCTCTCTAATCGTCTATTTCTAGGGATTTCTTTGGGGCTCAGCAGGTGGGGCTGCCTATTAAAGCTTGTCATATAATTGTATATAATTTATTAAATTGGCTACTTAATTATTATATGTAACTTTCCCATTTGAAGCATATGTATAATTGGACAGAATGTATGATTGCTTCTACTGTTGGTGGTCTGTTAAATAATCCCAATATTTTTTGCGGTGTTTATTTTGTTATGAATTTGTCTGATGTAATTAAAT

Network for GWHGAAEX007417

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10409.8	PTEN_C2	200	337	7.10E-27
PF02181.22	FH2	859	1229	5.10E-109

Protein Sequence

>GWHPAAEX007417
MSLLSRLFYRRPPDGLLEFAERVYVFDSCFSTEVLSDGVYQIYLSEIVTELYEVCPDSSILAFNFREGGKRSKFAQIIAEYDVTVIDYPRQYEGCPILPLSVVHHFLRIFESWLFEGYNQNIVLLHCERGGWPLLAFLLASLLIFRKLHHGEQRTLQAVHREAPKGLLQLLSPLNPLPSQLRYLQYVARRNISREWPPSERVLSLDCIILRSIPNFDSDKGCRPFVRIFGQYPHNPNRIERNTLFSMSKKKKSLRHYSQEDFGVIKIDIRCLVQGDLVLECVHWNLDPEREVMMFRVMFNTAFIRSNILILSYEDIDILWDAKGRYPKSFRAEILFGEVDNVSSPMTPTTTLNGEAIGGLPIEAFSMVQDLFDGTEWAENSEDAAFWLLKQISANALHERIENLMLTDVRDFSRQHSKGSDGMSYASPFDSEEEKDSVTSDSVTSGDHEKIQHGAMISTPLEGLHDEPTCQYPESTGCLPSTSVNSINVANPASALVMPLQFLLAPQPQPALPPSPLLLSSLGKSLGQPAQSDSEVATSLPPPPPLPMPSGDYQPPPNPLIPPFSLSSKVLPPQHPPPAPPAPPVPPAPPAPPAPPPPPLSQTNSASMMVCVPPSPSPPPPSSATKVQALPLPPPPPPLPQSSVHSSSKATDRPPSPPPPPSTTSIQNTTPASPPSPLLLSGRNVPTPPAPPAPPLSISKGPPPPPPPSISKDPLPPPPSISKGPPPPPPPPHTISIQKAPPVPPPPPHTISIQKAPPVPPPPPHTISIQKAPPVPPPPPHTISIQKAPPVPPPPSLSGYKAPVPPTPPQAPRVAIKEVPNPPQVSRVEPPSIPTALPFAARGKAVATGSMRGHALTNSQKKGSLKPLHWVKVTKAIQGSLWADSNKSESQSKAPEIDISELESLFSTAVDNGRGMDKVVARRGTNTNKPEIIHLVDMRRANNCEIMLTKITMPLPKMINAVLILDTTALELDQVENIIKFCPSKEEMEMLKNYSGNREILGKCEQFFLELMKVPRVESKLRVFSFRISFSTQVKELRSILNIINDASNEVKNSVKLRQIMQTILTLGNALNKGTARGSAVGFRLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFSKDLIHLEAASKIQLKMVAEEMQAVSKGLEKVELELSASENDGEISLGFRKALKSFLDTAEADVRSLISLYSEVGRSADSLAQYFGEDPARCPFEQVTSILVVFVNTFNKSHEENIRNAEAEKKKQEIAEKKLEMAATKEKGNISVK

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	21.850
SRP064423	SRR2545915	Juvenile tuber	17.040
SRP108465	SRR5643513	five period of Gastrodia elata	26.090
	SRR5643514	five period of Gastrodia elata	31.380
	SRR5643515	five period of Gastrodia elata	26.770
	SRR5643524	five period of Gastrodia elata	32.030
	SRR5643525	five period of Gastrodia elata	19.240
	SRR5643528	five period of Gastrodia elata	18.740
	SRR5643658	five period of Gastrodia elata	17.340
	SRR5643659	five period of Gastrodia elata	18.690
	SRR5643660	five period of Gastrodia elata	17.740
	SRR5643661	five period of Gastrodia elata	16.480
	SRR5643662	five period of Gastrodia elata	17.090
	SRR5643663	five period of Gastrodia elata	18.410
	SRR5643664	five period of Gastrodia elata	18.090
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	19.100
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	27.160
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.750
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.150
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.810
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.220
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	14.370
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.780
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	18.480
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	16.100
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	24.940
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	24.940
SRP279888	Gastro	Gastrodia elata tuber	12.06
	Juven	Juvenile tuber	33.70
	Mother_Gastro	Mother tuber of Gastrodia elata	22.66
	Mother_Juven	Mother tuber of Juvenile	34.01